Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02501 ATGCTTATGGTTCATGTGCAAGCAGCCCAAATAGATCGTTGGCCTCAAAAAACAGATGTGACTCTTATTAATTTTTTGGGTGTCGATGCCTTTGTTCATTGCCAATCCAAGGATGATGATTTAGGTGAAAGAACTTTAGCAAGTGGCCAAAACCAACAATGGTCATTTGTACCCAATGTTAGTGGAACAACATTGTTTTGGTGTTATTTCAAATGGAACAATATTGAAAAGACTGTCGAAATTTATAGTTTTGATCATGATGACAAAGAGTGTGTCAAAAAATGTTGGCGTAGTCTTAAGAAGGATGGAATCTATTATTATAACGAGTTAGAATCTTTGTGGTATTTGAGATACTCATGGTAA 363 0.3526 MLMVHVQAAQIDRWPQKTDVTLINFLGVDAFVHCQSKDDDLGERTLASGQNQQWSFVPNVSGTTLFWCYFKWNNIEKTVEIYSFDHDDKECVKKCWRSLKKDGIYYYNELESLWYLRYSW 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02501 120 PANTHER - 10 111 IPR010264 -
Car03g02501 120 Pfam Plant self-incompatibility protein S1 30 120 IPR010264 -
Car03g02501 120 PANTHER PLANT SELF-INCOMPATIBILITY PROTEIN S1 FAMILY 10 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02501 Car-Chr3 70891330 70891692 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02501 16 120 Carbohydrate Esterase AT3G16970 31.818 2.06e-10 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02501 - - cam:101499445 127.487