Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02500 ATGAAATTCAAAGCTTTGATTATAAGTGTTTTATTGGTGGTCATTAGGGTTGGTGTACAAGCAAGCCAAACAGATGGCTTATTTGAAGGCGTAACAAGTGTTCTTATTAAAAATGATTTGCCAGCTCCTAATAAACTCTTTCTACATTGCCAATCAAAAGATGATGATTTAGGTGAACGAACTCTAGTAACTGGGGGAATAAGAACATGGTGGTTCAGACCCAACATTTTTGGAACAACTTTGTTTTATTGCTATTTCAATTGGAACAATAAGGTAATGCGTGTGGACGTTTTCAGTGATAGGCATCAAAATTGTCACGTACACTGCTTACGAAGTGTTAGAGAAGATGGAATCTATTTTTTAATTGAGAAGGATGATCAGTGGCATTTGAAACAATCATGGATGCCTCAAAATTAA 417 0.3549 MKFKALIISVLLVVIRVGVQASQTDGLFEGVTSVLIKNDLPAPNKLFLHCQSKDDDLGERTLVTGGIRTWWFRPNIFGTTLFYCYFNWNNKVMRVDVFSDRHQNCHVHCLRSVREDGIYFLIEKDDQWHLKQSWMPQN 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02500 138 PANTHER - 30 128 IPR010264 -
Car03g02500 138 Pfam Plant self-incompatibility protein S1 34 134 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02500 Car-Chr3 70855120 70855536 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02500 19 138 Carbohydrate Esterase AT3G16970 32.000 2.53e-16 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02500 - - cam:101499445 107.071