Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02492 ATGGGAAAATCAAATAGTTCTAATTCTAAGGGATTTTGGAAGGGAGGGTTTGGAATAGTTTTGCCAATGATGAGAAAATTACTAAACAAAACAATATTGtcatcaccatcatcatcatcattatcagcatcatcatcaCATTATTCTAGTAGAAAAGGGGTGAAGCGAGGTCATTTTGTTGTGATTGCAACTCAAGGGTGGAAACCAGAGAGATTTTATATTGAATTAGGATATTTAGATGACCCTGAATTTGTGAAATTGTTGAAGCAAGCTGAAGAAGAGTTTGGTTTCTCTCAAGTTGGAGCACTTGCAATTCCTTGTGAACCAGATGAGTTGAAGAGAATCATTGGAAGGAAAAAGCACATCAACAACAACAAGGGTATTAATATTACTTGTTAG 399 0.3183 MGKSNSSNSKGFWKGGFGIVLPMMRKLLNKTILSSPSSSSLSASSSHYSSRKGVKRGHFVVIATQGWKPERFYIELGYLDDPEFVKLLKQAEEEFGFSQVGALAIPCEPDELKRIIGRKKHINNNKGINITC 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02492 132 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 45 132 IPR003676 GO:0009733
Car03g02492 132 PANTHER SMALL AUXIN-UP RNA-RELATED 45 132 - -
Car03g02492 132 MobiDBLite consensus disorder prediction 34 50 - -
Car03g02492 132 Pfam Auxin responsive protein 37 116 IPR003676 GO:0009733
Car03g02492 132 MobiDBLite consensus disorder prediction 34 53 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02492 Car-Chr3 70737072 70737930 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02492 23 127 Calmodulin-binding Proteins AT5G20810 32.432 2.01e-10 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02492 - K14488 gmx:100795119 144.05