Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02486 atGGTACATTTATTTGATGCAACCTGGTCTGGTATTATGAAGTGTTTTACATTCCACTATGGAGATAAGAAAGATGAACCAAAAGGCTTGCAATCCGGGTCTGGACGGTCAGACAGTTCCACATATGTTGAGGTTGAAGGTAGAAGATGCGGTTCTGAATTGAATTCCCAGGATGTCTCGGACAGTGGCAGCGTGGAATCCCTTAGGAAGAATGTGTCTCCCAGTTTGTCCCAAAGACCTAGCAACCTTAGAGTGTTTACTGTATCTGAACTGAAATCGGCCACAAAGAATTTCAGTCGATCTGTTATGCTTGGAGAAGGTGGATTTGGGTGTGTCTATCAGGGAGTAATTAGAAGTGTAGATGACCCTTCTGGAAGAATTGAGGTTGCAGTTAAACAACTTAGTAAAAGAGGAGTTCAGGGGCATAGGGAATGGGTGACTGAAGTGAATGTTCTGGGCATTGTTGAGCATCCCAATCTTGTGAAACTAGTCGGCTACTGTGCCGATGATGACGAAAGAGGAATCCAGCGGCTTCTGATTTATGAATACATGCCAAACAGAAGCGTGGAACACCATTTATCTCACCGAGCTGAGACTCCTCTCCCTTGGAGTAGGAGATTAAAAATAGCACAAGACGCGGCTCGTGGATTAACGTATCTGCATGAGGAAATGGATTTTCAGATAATTTTCAGAGATTTCAAATCTTCAAATATCCTTTTGGATGATCAGTGGAATGCAAAGCTATCAGACTTCGGGTTAGCTAGACTGGGACCGTCGGATGGACTAACTCATGTCTCAACAGCGGTTGTAGGAACAATGGGGTATGCATCTCCTGAATATGTTCACACTGGACGTCTCACATCAAAAAACGATGTATGGAGCTACGGAATTTTCCTTTATGAACTCATTACTGGTAGGCGCCCTTTAGATCGAAATCGTCCCAAGGGTGAACAGAAAATGTTGGAATGGATAAAGCCATACCTATCAGACGCAAAGAAATTTCAACTGATATTGGATCCAAGACTTGATAAGAAACAAGTAATTAAATCAGCCCAGAGACTCGCTGCGATAGCTAACCGATGTCTAGTTAAAAACCCGAAAAGTCGTCCAAAGATGAGCGAGGTTTTGAAAATGGTGGAAGGAGTAGTAGGATTATCGTCTAGTGCTAATTCACAGATACCCTTGGAGAACGTGTCAAGAGTTGAAGTTTCCCATGACACTGAAACAAACAACAACAAGAAACGAACGATGGATCAGAAGCACAGAGAAAGTAATTGGTTTGTTAGGATGTGGAGACCAAAGATTGTAAAAACAGGTTGA 1320 0.4265 MVHLFDATWSGIMKCFTFHYGDKKDEPKGLQSGSGRSDSSTYVEVEGRRCGSELNSQDVSDSGSVESLRKNVSPSLSQRPSNLRVFTVSELKSATKNFSRSVMLGEGGFGCVYQGVIRSVDDPSGRIEVAVKQLSKRGVQGHREWVTEVNVLGIVEHPNLVKLVGYCADDDERGIQRLLIYEYMPNRSVEHHLSHRAETPLPWSRRLKIAQDAARGLTYLHEEMDFQIIFRDFKSSNILLDDQWNAKLSDFGLARLGPSDGLTHVSTAVVGTMGYASPEYVHTGRLTSKNDVWSYGIFLYELITGRRPLDRNRPKGEQKMLEWIKPYLSDAKKFQLILDPRLDKKQVIKSAQRLAAIANRCLVKNPKSRPKMSEVLKMVEGVVGLSSSANSQIPLENVSRVEVSHDTETNNNKKRTMDQKHRESNWFVRMWRPKIVKTG 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02486 439 SUPERFAMILY Protein kinase-like (PK-like) 77 379 IPR011009 -
Car03g02486 439 ProSitePatterns Protein kinases ATP-binding region signature. 104 132 IPR017441 GO:0005524
Car03g02486 439 CDD STKc_IRAK 104 381 - -
Car03g02486 439 ProSiteProfiles Protein kinase domain profile. 98 383 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g02486 439 Pfam Protein kinase domain 100 377 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g02486 439 Gene3D Phosphorylase Kinase; domain 1 69 183 - -
Car03g02486 439 MobiDBLite consensus disorder prediction 401 421 - -
Car03g02486 439 Gene3D Transferase(Phosphotransferase) domain 1 184 401 - -
Car03g02486 439 PANTHER KINASE 1B 19 434 - -
Car03g02486 439 PANTHER OS01G0588500 PROTEIN-RELATED 19 434 - -
Car03g02486 439 MobiDBLite consensus disorder prediction 53 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02486 Car-Chr3 70679356 70683496 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02486 13 394 Glycoside Hydrolase AT3G07070 40.051 1.87e-92 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Car03g02486 Pkinase 1.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02486 - - gsj:114400704 741.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02486 03 70679356 70683496 Car03g02486 03 70679356 70683496 ECH