Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02485 ATGGAATTGAATGGAATGAGGATGAAGGCCTTGTTGGTCTCTCACATTTTATTATGCACAAGTTTTCTACTACTACCACCACATGTTCAATGTGCAGATAAAGATGATTCTGTTGCACCTTCATTTTACACACAAGAAATCTACAAAGAGCTTGAAGGTCTTACTACCGCTTTAACAAAAGACATTAAGGCAGATTTAGACTTCTGCATTAAGGATGTGAGGAAAGACTGGGAGGAAGCCTTTGATTTTAAGGGAAAGTTGGATTTTGTGGATGCTTGTGTTAAGCAAAAAGGTGATTTTAGAGATAGAATATGTACTACTGCTGAAGTGAGGTACTACTTTCACAGTTATTTCCAGCAGGGAGGCTCATCTGCTGCCAGTTACGTAAAACCTAACAAAAATTGCAACTTGACTTCATGGTTGTCTGGTTGTGAACCTGGTTGGAGTTGTAGTGCTGACCAGAAAATTGATCTCAAAAAGGATATAAAGGAGATTCCATCTAGAGTCAGTGATTGTCAACCTTGTTGTGAAGGGTTTTTCTGCCCTCAGGGACTGACTTGCATGATAACATGTCCACTTGGGTCTTATTGTCCACTTGCAAAACTGAATCAAACAACTGGAGTATGCGATCCATATAGTTACCAAATTCCTGCAGGAGATACAAATCATACTTGTGGCAGTGCTGATATTTGGTCTGGTGTTGTGAACAATAGTGATATCTTCTGTTCTCCAGGATCATATTGTCCATCTCCGACACGCAAAGTTTCTTGCGATAAAGGATATTACTGCAGGATGGGTTCAACTCATCAAAATCCATGCTCCAAGCTGAGTAGCTGTAATCCAAAAACAGCAACACAAAATATGCATGCTTACGGCGCTTTGATTATTGTTGCTATGAGTACTCTTCTGATCTTCATGTATAACTTTTCTGATCAAGTGCTAGCTACTAGAGAAAGAAGGAAGGCAAAATCAAGAGAAGCTGCAGCGAAACACGTAAGAGAAACGGTACAAGCTCGCGAAAGATGGAAAACAGCAAGAGAATTGGCTAAGAAAAGTTCATCAGGATTGCAAAAACAGTTGTCTCGAACCTTCTCGCGCAAGAAATCCGGGAAGCAAGGTGATCTAGTTCTATCAGATTCATCAAGCCAACCTGAGCAGTCGTCGAAATCCAAAGATAAGGAGCCTAGTAATCTTACTAAAATGATGCACTCCATTGAGGATGGTGGCCATGAAGGATTTGATTTTCAGATTGGTGATAAGAACATTAAAAAGCAAATGCCAAAGGGAAAAAACTTACACACTCATAGCCAAATTTTAAGGTATGCTTATGGTCAAATTGAGAAGGAGAAAGCTCAACAAGAGCAAAACAATAACTTGACATTCTCAGGAATAATTTCAATGGCTGCTGAGGGTGAGAAGGTAAACACAAGGCCTTCAATTGAGGTAGCTTTCAAAGATCTAACACTCACTTTGAAAGGTAAAAACAAACATGTACTGAGGTGTGTGACTGGTAAAATCATGCCCGGTCGAGTTTCAGCTGTTATGGGACCCTCAGGAGCTGGAAAAACTACATTTCTTTCAGCTTTGGCAGGAAAAACAAGAGGTTGCAATATTTCAGGATCAATTTTAGTTAATGGAAAAAAGGAATCCATTCACTCTTATAAGAAAATTACTGGTTTTGTGCCACAAGATGATATTGTGCATGGAAACTTGACAGTTGAGGAAAATCTTCGGTTCAGCGCAAGATGCAGGCTCCCTGGGGACATGCCAAAACCGGATAAGGTTCTGATTGTTGAAAGAGTGATCGAGTCCTTGGGACTTCAGCCAGTAAGGGATTCTCTAGTTGGGACAGTAGAGAAGAGAGGCATATCTGGAGGGCAAAGAAAACGTGTAAATGTAGGACTAGAGATGGTGATGGAGCCTTCATTATTAATCTTAGACGAGCCTACAACTGGTTTGGACAGTGCATCTTCTAGTTTACTTCTTAAAGCGCTTCGCCGTGAAGCTCTTGAAGGAGTAAACATCTGCATGGTACTTCACCAACCAAGCTATACTTTGTTCAGAATGTTTGATGATATAATATTTCTAGCCAAAGGTGGTCTTACTGCATATCACGGTCCTGTGAAAAAAGTAGAAGAATACTTTACTGGCATTGGAATTCCGGTACCGGATCGCGTAAATCCTCCAGACCATTTCATTGATATTCTGGAAGGTTTAGAGAAACCAACTTCAGGTGTAACTGTTGAAACACTTCCTGTGAGATGGATGCTTCATAATGGATATTCAGTACCACCAGACATGCTTCATTTGGCTGATCAAATTGCTGCTCCTTCATCTGACACAAAAGAAACTAATGCATCAAAGGCTAATGAAGAAGCTTCAGATCTATCCTTTTTTGTTGAGTTTTGGGAGGATTTGAAGAGCAATATTAGGATCCAACGAGATCACATAGAAGCAATCTTTACAATACAAAAGGACTTATCTGAACGAGCTACTCCTGGTGTAGCCCGACAATATAGATATTTCGTTGGCCGGGTTGGCAAGCAGCAGCTGAGAGAAGCAAAGTTACAAGCAGTGGACTATCTCCTTTTATTGGTTGCCGGTGCTATCTTAGGAACACTTACCAAAGTGAATGATGAAACATTTGGGTCCCTTGGTTATACATATACAGTCATTTCTGTTTCTCTACTTTGTAAGATTGCAGCTTTGAGATCATTTTCTCAGGACAAGTTACAATACTGGAGAGAAAGTGCAGCTGGAATAAGCAGTTTAGCCCATTTTCTCTCCAAAGATACAATTGACCTTTTCAGTACAATCATCAAACCTGTAGTTTACCTCTCCATGTTCTATTTTTTAAGCAATCCAAGGTCAAGCTTTGGAAGTAATTACATAGTTTTGGTTTGTCTTGTGTACTGTGTGACTGGAATGGCTTATGCATTAGCCATCTTCTTTCAGCCTGGTCCTGCTCAGCTGTGGTCAGTGCTTCTTCCTGTTGTTATGACTCTCATTGCCAACCAAAATAGAGACACTGCATTTATGAAGATCCTAGTACAATTGTGTTATCCAAAATGGGCTCTGGAGGGCTTTATCATTGCAAATGCTGAAAGGTACACTGGGGTATGGCTGATAACTCGTTGTGGTTCACTAATGAGCAGTGGTTATGATGTCAATGCATGGCATATTTGTTTGCTTGTCCTCATTTTAAATGGAATAATTGCCCGAATTATAGCTTTCTTTTGTCTCGTAATTTCTCAAAGGAAATGA 3264 0.4013 MELNGMRMKALLVSHILLCTSFLLLPPHVQCADKDDSVAPSFYTQEIYKELEGLTTALTKDIKADLDFCIKDVRKDWEEAFDFKGKLDFVDACVKQKGDFRDRICTTAEVRYYFHSYFQQGGSSAASYVKPNKNCNLTSWLSGCEPGWSCSADQKIDLKKDIKEIPSRVSDCQPCCEGFFCPQGLTCMITCPLGSYCPLAKLNQTTGVCDPYSYQIPAGDTNHTCGSADIWSGVVNNSDIFCSPGSYCPSPTRKVSCDKGYYCRMGSTHQNPCSKLSSCNPKTATQNMHAYGALIIVAMSTLLIFMYNFSDQVLATRERRKAKSREAAAKHVRETVQARERWKTARELAKKSSSGLQKQLSRTFSRKKSGKQGDLVLSDSSSQPEQSSKSKDKEPSNLTKMMHSIEDGGHEGFDFQIGDKNIKKQMPKGKNLHTHSQILRYAYGQIEKEKAQQEQNNNLTFSGIISMAAEGEKVNTRPSIEVAFKDLTLTLKGKNKHVLRCVTGKIMPGRVSAVMGPSGAGKTTFLSALAGKTRGCNISGSILVNGKKESIHSYKKITGFVPQDDIVHGNLTVEENLRFSARCRLPGDMPKPDKVLIVERVIESLGLQPVRDSLVGTVEKRGISGGQRKRVNVGLEMVMEPSLLILDEPTTGLDSASSSLLLKALRREALEGVNICMVLHQPSYTLFRMFDDIIFLAKGGLTAYHGPVKKVEEYFTGIGIPVPDRVNPPDHFIDILEGLEKPTSGVTVETLPVRWMLHNGYSVPPDMLHLADQIAAPSSDTKETNASKANEEASDLSFFVEFWEDLKSNIRIQRDHIEAIFTIQKDLSERATPGVARQYRYFVGRVGKQQLREAKLQAVDYLLLLVAGAILGTLTKVNDETFGSLGYTYTVISVSLLCKIAALRSFSQDKLQYWRESAAGISSLAHFLSKDTIDLFSTIIKPVVYLSMFYFLSNPRSSFGSNYIVLVCLVYCVTGMAYALAIFFQPGPAQLWSVLLPVVMTLIANQNRDTAFMKILVQLCYPKWALEGFIIANAERYTGVWLITRCGSLMSSGYDVNAWHICLLVLILNGIIARIIAFFCLVISQRK 1087
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02485 1087 PANTHER WHITE-BROWN COMPLEX HOMOLOG PROTEIN 30-RELATED 36 1083 - -
Car03g02485 1087 Pfam ABC-2 type transporter 680 1087 IPR043926 GO:0140359
Car03g02485 1087 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 479 705 IPR027417 -
Car03g02485 1087 CDD ABCG_EPDR 479 706 - -
Car03g02485 1087 MobiDBLite consensus disorder prediction 323 397 - -
Car03g02485 1087 MobiDBLite consensus disorder prediction 323 348 - -
Car03g02485 1087 Pfam ABC transporter 502 650 IPR003439 GO:0005524
Car03g02485 1087 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 36 1083 - -
Car03g02485 1087 SMART AAA_5 508 700 IPR003593 -
Car03g02485 1087 ProSitePatterns ABC transporters family signature. 623 637 IPR017871 GO:0005524
Car03g02485 1087 Gene3D - 470 717 IPR027417 -
Car03g02485 1087 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 482 723 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02485 Car-Chr3 70666044 70672914 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02485 509 702 Calmodulin-binding Proteins AT2G36910 29.208 1.44e-09 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02485 - - mtr:MTR_7g101780 1870.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02485 03 70666044 70672914 Car04g00978 04 9842636 9849995 ECH
Car03g02485 03 70666044 70672914 Car04g01876 04 20288088 20307104 ECH
Car03g02485 03 70666044 70672914 Car03g02485 03 70666044 70672914 ECH