Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02481 ATGGAAGCAACAACGAACATGACAAAAACCAACGGTAATGATTCATTCTGTTTGATCAAGAATGCTAACAACATGAAAGTGATCAATGGTGGAGATCCTTTGAATTGGGGTGTGGCGGCGGAGGCCATGAAGGGAAGCCACTTAGATGAGGTGAAGCGTATGGTGGAGGAGTACCGGAAACCGGTGGTTCGTCTAGGTGGTGAGACGCTGACGATTTCTCAGGTGGCTGCCATTGCCACACATGACCATGGTGTCACGGTGGAGCTTTCGGAATCTTCAAGGCCCGGCGTTAAGGCGAGTAGTGATTGGGTTATGGAGAGTATGAATAACGGCACTGACAGTTACGGTGTCACCACCGGTTTCGGCGCCACGTCACACCGGAGAACCAAACAGGGTGGTGCTTTGCAAAAAGAGCTCATAAGGTTCTTGAATGCAGGAATATTTGGCAATGGAACTGAGTCAAACCACACACTACCACACACAGCAACAAGAGCAGCAATGCTAGTTAGAATCAACACACTTCTCCAAGGCTATTCAGGCATTAGATTTGAAATCTTAGAAGCCATAACCAATCTCCTAAACAACAACATCACACCATGTTTACCACTTCGTGGAACAATCACGGCATCAGGAGATTTAGTCCCTCTTTCTTACATTGCTGGTTTACTTACTGGTAGACCAAATTCAAAAGCTGTTGGTCCCTCTGGAGAAGTGCTTAATGCCAAACAAGCTTTTCAAATGGCTGGAATCAATTCTGAGTTCTTTGAATTGCAACCAAAAGAAGGACTTGCACTTGTTAATGGAACTGCTGTTGGGTCTGCTTTAGCTTCTATTGTTCTGTTTGATGCTAATATATTAGCTGTTCTCTCTGAAGTTTTATCAGCTATTTTTGCTGAAGTTATGCAAGGAAAACCCGAGTTCACTGATCATTTGACGCATAAGTTGAAGCATCATCCTGGTCAAATTGAAGCTGCTGCTATTATGGAACATATTTTGGATGGAAGTTCTTATGTTAAAGCAGCTAAGAAGTTACATGAGACAGATCCTTTGCAGAAGCCGAAACAAGATCGTTACGCGCTTAGAACTTCGCCGCAATGGCTTGGTCCTTTGATTGAAGTTATTAGATTTTCAACCAAGTCGATTGAGAGAGAGATTAACTCTGTCAATGATAACCCTTTGATCGATGTTTCGAGGAACAAGGCCTTACATGGTGGAAATTTTCAAGGAACGCCTATTGGAGTGTCGATGGATAATACTCGATTAGCTCTTGCATCGATTGGTAAACTCATGTTTGCTCAATTCTCTGAGCTTGTCAATGATTTTTACAATAACGGGTTGCCTTCGAATCTTTCTGCTAGTAGGAATCCAAGTTTGGATTATGGTTTCAAAGGAGCTGAAATTGCTATGGCTTCTTATTGTTCTGAGATACAATATCTTGCAAATCCGGTTACCACTCATGTTCAAAGTGCTGAGCAGCATAACCAAGATGTAAACTCATTGGGTTTGATTTCTTCCAGGAAAACCAATGAAGCCATTGAGATTCTAAAACTCATGTCTTCCACATTCTTGATTGCACTTTGCCAAGCAATTGACTTAAGGCATTTGGAAGAGAATTTGAAAAACTCAGTCAAGAACATTGTAAGCCAAGTTGCTAAGAGGACACTTACCACGGGTGTTAATGGAGAACTTCATCCTTCAAGGTTTTGTGAAAAGGACTTATTGAAAGTGGTTGATAGGGAGCATGTGTTTGCCTATATCGATGATCCTTGTAGTGCTACATACCCTTTGATGCAAAAATTAAGACAAGTGTTAGTGGATCATGCATTAGTAAATGGAGAAAATGAGAAGAATTTGAACACATCAATCTTCCAAAAGATTGCAACTTTTGAGGATGAGTTGAAGACCCTTTTGCCTAAAGAAGTTGAAAGTGCAAGAGCTGCTTATGAGAGTGGAAATCCTGCAATTCCAAACAAGATCAATGGATGCAGATCTTATCCACTTTACAAGTTTGTGAGGGAGGAGTTGGGAACAAGTTTGCTAACTGGTGAAAAGGTCATTTCACCAGGTGAGGAGTGTGACAAATTGTTCACAGCGATGTGTCAGGGAAAAATCATCGATCCTCTTTTGGAATGTTTGGGAGAGTGGAATGGTGCTCCTCTTCCAGTTTGTTAA 2172 0.4171 MEATTNMTKTNGNDSFCLIKNANNMKVINGGDPLNWGVAAEAMKGSHLDEVKRMVEEYRKPVVRLGGETLTISQVAAIATHDHGVTVELSESSRPGVKASSDWVMESMNNGTDSYGVTTGFGATSHRRTKQGGALQKELIRFLNAGIFGNGTESNHTLPHTATRAAMLVRINTLLQGYSGIRFEILEAITNLLNNNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKAVGPSGEVLNAKQAFQMAGINSEFFELQPKEGLALVNGTAVGSALASIVLFDANILAVLSEVLSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVKAAKKLHETDPLQKPKQDRYALRTSPQWLGPLIEVIRFSTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLALASIGKLMFAQFSELVNDFYNNGLPSNLSASRNPSLDYGFKGAEIAMASYCSEIQYLANPVTTHVQSAEQHNQDVNSLGLISSRKTNEAIEILKLMSSTFLIALCQAIDLRHLEENLKNSVKNIVSQVAKRTLTTGVNGELHPSRFCEKDLLKVVDREHVFAYIDDPCSATYPLMQKLRQVLVDHALVNGENEKNLNTSIFQKIATFEDELKTLLPKEVESARAAYESGNPAIPNKINGCRSYPLYKFVREELGTSLLTGEKVISPGEECDKLFTAMCQGKIIDPLLECLGEWNGAPLPVC 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02481 723 Gene3D - 23 269 IPR024083 -
Car03g02481 723 PANTHER PHENYLALANINE AMMONIA-LYASE 1-LIKE 26 723 - -
Car03g02481 723 Pfam Aromatic amino acid lyase 70 548 IPR001106 -
Car03g02481 723 Gene3D Fumarase/aspartase (Central domain) 270 718 - -
Car03g02481 723 PANTHER HISTIDINE AMMONIA-LYASE 26 723 IPR001106 -
Car03g02481 723 CDD PAL-HAL 68 533 IPR001106 -
Car03g02481 723 SUPERFAMILY L-aspartase-like 32 723 IPR008948 GO:0003824
Car03g02481 723 Gene3D - 536 657 IPR023144 -
Car03g02481 723 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 205 221 IPR022313 GO:0016841
Car03g02481 723 TIGRFAM phe_am_lyase: phenylalanine ammonia-lyase 32 712 IPR005922 GO:0005737|GO:0006559|GO:0016841
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02481 Car-Chr3 70615306 70619328 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02481 27 723 Monolignol Biosynthesis Gene Families AT2G37040 83.357 0.0 1243
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02481 K10775 - gmx:100811101 1297.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02481 03 70615306 70619328 Car04g00983 04 9882090 9889339 ECH
Car03g02481 03 70615306 70619328 Car04g01871 04 20206282 20210091 ECH
Car03g02481 03 70615306 70619328 Car03g02481 03 70615306 70619328 ECH