Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02475 ATGGGTAACATCTCAACCACCGCCGGTAACAACCGTCGTCGCCACTCTGGCGGTTCAAGGAGAAGTCACCCACCACCACCTCCTCCAGTAACACCACAGCCCGAAATCGCAACCCACCCACCATTTGTGTACCCTGGAGCCGCACCGTACCCGAACCCACCTCCGATGCATTATCCTCAGTATCATTACCCTGGTTATTATCCACCTGTGCCTATGCCCCATCAGCATCAACATCAACATCATCCACACATGGACCCAGATTGGGTTTCCCGTTACTACCCTCCTGGACCTGTCGTGAATCAACCTGCACCCTTTGTTGAGCATCAGAAAGCCGTTACAATTAGGAACGATGTCAATATTAAAAAGGAGACTCTTGCGGTTTCACCTGATGAGGAAAACCCTGGTTTCTTCCTTCTTTCCTTTACCTTTGATGCTACCGTTTCTGGGAGCATCACCGTATTTTTCTTTGCAAAAGAAGGTGATGGCTGCATCCTCATATCGACGAAGGAAAACCAACTCGCACCTGTGACCGTACAATTCCAGCAAGGTCTTGGACAAAAGTTTAGACAACCAGCTGGAACTGGTATTGACTTTTCAATGTTTGAGGAGTCAGATTTATTGAAGGTGGATGACATGGATGTCTATCCTCTAGCAGTGAAGGCAGATGCATCCCCTGAAAATCAGAATGGATCAAATGAAACTGCGACATCTGGTAATACAAACTCTCAGATAACTCAAGCGGTGTTTGAAAAGGAGAAAGGAGAATTCCGGGTAAAAGTTGTTAAGCAGATCTTGTCGGTGAATGGAATGAGGTATGAGCTGCAAGAGATATATGGTATTGGAAATTCAGTGGAGAGTGACTTTGATGATAATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAGAGTGTGTCATCTGCTTGTCAGAGCCTCGTGACACAATTGTTCATCCCTGCCGACATATGTGCATGTGTAGTGGATGTGCAAAGGTTTTGA 1029 0.4354 MGNISTTAGNNRRRHSGGSRRSHPPPPPPVTPQPEIATHPPFVYPGAAPYPNPPPMHYPQYHYPGYYPPVPMPHQHQHQHHPHMDPDWVSRYYPPGPVVNQPAPFVEHQKAVTIRNDVNIKKETLAVSPDEENPGFFLLSFTFDATVSGSITVFFFAKEGDGCILISTKENQLAPVTVQFQQGLGQKFRQPAGTGIDFSMFEESDLLKVDDMDVYPLAVKADASPENQNGSNETATSGNTNSQITQAVFEKEKGEFRVKVVKQILSVNGMRYELQEIYGIGNSVESDFDDNXXXXXXXXXXXXXXXXXXXXXKSVSSACQSLVTQLFIPADICACVVDVQRF 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02475 342 PANTHER MAHOGUNIN 1 292 IPR045194 GO:0061630
Car03g02475 342 MobiDBLite consensus disorder prediction 220 243 - -
Car03g02475 342 MobiDBLite consensus disorder prediction 224 243 - -
Car03g02475 342 PANTHER E3 UBIQUITIN-PROTEIN LIGASE 1 292 - -
Car03g02475 342 Coils Coil 313 313 - -
Car03g02475 342 MobiDBLite consensus disorder prediction 1 49 - -
Car03g02475 342 MobiDBLite consensus disorder prediction 21 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02475 Car-Chr3 70518889 70523235 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02475 86 285 C3H Transcription Factor Family AT3G09770 61.881 2.52e-82 252
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02475 - - aprc:113862864 356.295
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02475 03 70518889 70523235 Car03g02475 03 70518889 70523235 ECH