Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02469 ATGGACAAAAAAAATCATCATTCAGAAATTCAACTCCCTCCTGGATTTAGGTTCCACCCTTCAGATGAAGAGCTCATTGTTCACTATCTAAGAAACAAAGTCACTTCATCTCCTCTTCCTGCTTCATTCATAGCAGAAATAGATCTTTACAAGTACAATCCATGGGAGCTCCCAAGTAAAGCTTTGTTTGGGGATGAAGAATGGTATTTCTTTACTCCAAGAGATAGAAAGTATCCAAAAGGATTGAGGCCTAATAGAGCAGCTGGTGCAGGTTATTGGAAAGCAACTGGAACTGACAAACCTATTTTTACTTCATATGGGTTGAAAAGCATTGGAGTGAAGAAATCTCTTGTGTTCTATAAGGGACGTCCACTAAAAGGGTCTAAGACTGAGTGGATCATGCATGAGTATAGGTTGCATGATTCAATTATCTCAAATTCCAACCATAGTGGGTCTATGAGACTGGATGAGTGGGTGTTATGCCGAGTTCGACAAAAAACCGGCAGCCCAAGAAGCAGTTGTGAAGATTCAAACGAACTTAGTTTTGAAACATCAAGTCACTTTCAGCAAATGAATGACAACTCTAGTCCTGAACCAGTCAAAAACTATGTGCAGAAACAGAATGAATATCCAATGTTACCTTATATTTTAGCTTCTAAGAGTGTTCTACCTAATTCCATTGGTATGTCCTCAAACAATGAAAAATCACATGCTTCATTGTATGAAAACAACTTAAACATAATAGGAGCACAGTTCTTATCATCTGCCGCCGAAGGATTGTTTAATCCGCAGAAGCGAAAAGCCGTTGAAGAGAATATTGAGATGGACTTTTATGCTGTCCTCAATAAAAATCTAAGCAGAGAAGTCGATGATGTGAATCAAAGACTTGAGATAGATTTAAGCAAAGGGTACAATTCCTACAACTTTGATCAGTGGACTTCAATCATACAACCTCAAGAGCTTAATAGCTTAGCCTTCACTGGATATACATAA 993 0.3817 MDKKNHHSEIQLPPGFRFHPSDEELIVHYLRNKVTSSPLPASFIAEIDLYKYNPWELPSKALFGDEEWYFFTPRDRKYPKGLRPNRAAGAGYWKATGTDKPIFTSYGLKSIGVKKSLVFYKGRPLKGSKTEWIMHEYRLHDSIISNSNHSGSMRLDEWVLCRVRQKTGSPRSSCEDSNELSFETSSHFQQMNDNSSPEPVKNYVQKQNEYPMLPYILASKSVLPNSIGMSSNNEKSHASLYENNLNIIGAQFLSSAAEGLFNPQKRKAVEENIEMDFYAVLNKNLSREVDDVNQRLEIDLSKGYNSYNFDQWTSIIQPQELNSLAFTGYT 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02469 330 SUPERFAMILY NAC domain 9 166 IPR036093 GO:0003677|GO:0006355
Car03g02469 330 ProSiteProfiles NAC domain profile. 12 166 IPR003441 GO:0003677|GO:0006355
Car03g02469 330 PANTHER NAC TRANSCRIPTION FACTOR 56 8 306 - -
Car03g02469 330 Gene3D NAC domain 21 169 IPR036093 GO:0003677|GO:0006355
Car03g02469 330 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 8 306 - -
Car03g02469 330 MobiDBLite consensus disorder prediction 170 199 - -
Car03g02469 330 Pfam No apical meristem (NAM) protein 13 139 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02469 Car-Chr3 70475807 70477677 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02469 8 171 NAC Transcription Factor Family AT1G69490 65.244 1.09e-79 242
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Car03g02469 NAM 1e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02469 - - cam:101491216 681.019
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02469 03 70475807 70477677 Car03g02469 03 70475807 70477677 ECH