Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02467 ATGGGGCATAGACACTTATACAATGCATCTCCAATGTTTGAGGGTGAGCCTGACCAGAATTGGAATCATATGCATACTGACCAACATCCTGTGAACCACAGTGGGACTAGCACTTCTGAGAATGGTTCTTTTATTTATCCTGTAGAAAATATATCTGTAGATAGCATTTATTTCCCCTCTCATTGGAACTCTACTGCAAGGTCAAATGGATATGCATCCTCAGGCCACAACATTGAAATACCTCCTCCTCATCAATTGGATGCATCAGGCACTTCTAATGATCATTTTATGCATTCATCTAGTGCTGGACCTTTCTTTGCAGTGTCTGAAAATTATGTACACCAGCcttcttcctcttcttcttcAAATTATGACAGACAAGCATTTCATGTTGATAGTGGTTTTATTGATCTTACAATGGGAAGTGGACGGGGGTCTCACAAGAGAAAGAGTCCTGGAATTCCTTCAGTCTATGAGAGAGGCGGTACAAGTGGATATTTCAATGCTGGGAGTTCAACTGATCTTCCTATACCTTCAGAATCGCGGCCAGAGAAGCCAAATATGGATTCTCAATACATGCCCTGGGATCATGCTGCTATTGCACCCGCATTCAGGGGTGCTGGTCTCTCTATAAAGGGTGAGAGTTCTATGCGGAATGTTAGGAGTCGTTCTGCACTTGATTTGGAATCCAACCTGTCTAGGACCCATTTATCGAGCAACCATTCACACAGCGTGTACCCTACTGTCCCGCCAGTCGGCCATCGTAGCATGGTGGATCTTTCAGCTCAGGCTTCTACCTCTTTGACAAGGGATTGGAGCCAAATGAATGTAACCCCTGCCAATGGAAGAATGTTATTATCAGAAACCAATACATTTGGTCTTGAGACAAATCACTTCCCTGTTGGAAATGCTGCTGCTTCTGCTAGTAATGCTATTGTGGATGTTGGGAACTTCCATCACGAATTTGGTACAAGCAGAAATCCTACTACTGCTCAAAGTTTTCAAAATTTGACTCAGACTTCTAGAGGAATTCGGAGCAATTACTCTCAGAGGTCCACTCCAGCTTTTAGGGCGGCTTCAAACTTGCGCTTGGGACATGTGACACCTTCAGATAATGGATTGCCCATGGTAGCTGAAGGTTACTCTTCTAGACATCCAAGGCCATTGAACACCATTGGCTGGCGGAACAGTGATAGAAATGGAAGGTCAAGAGTTTCTAGTGAAAGATATAGAGCATTGGCTGATGAGGCTGGTCTCCATGCTAGATTTTCCTCTGAGGTACCGGGTTTCATGATTGTTGAACGTGCTTCACTATATGGTTCTAGGAATATGCTtgatcaacacagagacatgaggctggacatagataacatgagctatgagGAACTACTTGCACTTGGGGAGAGGATTGGCCAGGTGAACACAGGATTGTCCGAGGATGTGCTTTCCAAGTGTTTGACAGAAACAATATATTGTTCATCTGACCAATGTCAGGATGAAGCAAGCTGTGTGATCTGTCTAGAAGAGTACAAGAACATGGACGATGTTGGGACACTTAAAACTTGTGGGCATGACTACCATGTGAGCTGCATTAAAAAATGGTTATCTATGAAGAAACTATGTCCTATCTGCAAAGCTTCTGCGTTGCCTGAGGATAAGAAGGATACATAA 1671 0.4183 MGHRHLYNASPMFEGEPDQNWNHMHTDQHPVNHSGTSTSENGSFIYPVENISVDSIYFPSHWNSTARSNGYASSGHNIEIPPPHQLDASGTSNDHFMHSSSAGPFFAVSENYVHQPSSSSSSNYDRQAFHVDSGFIDLTMGSGRGSHKRKSPGIPSVYERGGTSGYFNAGSSTDLPIPSESRPEKPNMDSQYMPWDHAAIAPAFRGAGLSIKGESSMRNVRSRSALDLESNLSRTHLSSNHSHSVYPTVPPVGHRSMVDLSAQASTSLTRDWSQMNVTPANGRMLLSETNTFGLETNHFPVGNAAASASNAIVDVGNFHHEFGTSRNPTTAQSFQNLTQTSRGIRSNYSQRSTPAFRAASNLRLGHVTPSDNGLPMVAEGYSSRHPRPLNTIGWRNSDRNGRSRVSSERYRALADEAGLHARFSSEVPGFMIVERASLYGSRNMLDQHRDMRLDIDNMSYEELLALGERIGQVNTGLSEDVLSKCLTETIYCSSDQCQDEASCVICLEEYKNMDDVGTLKTCGHDYHVSCIKKWLSMKKLCPICKASALPEDKKDT 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02467 556 SUPERFAMILY RING/U-box 493 549 - -
Car03g02467 556 MobiDBLite consensus disorder prediction 140 187 - -
Car03g02467 556 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 468 549 IPR013083 -
Car03g02467 556 ProSiteProfiles Zinc finger RING-type profile. 503 545 IPR001841 -
Car03g02467 556 MobiDBLite consensus disorder prediction 1 38 - -
Car03g02467 556 SMART ring_2 503 544 IPR001841 -
Car03g02467 556 Pfam Ring finger domain 502 545 IPR001841 -
Car03g02467 556 MobiDBLite consensus disorder prediction 24 38 - -
Car03g02467 556 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 1 552 - -
Car03g02467 556 MobiDBLite consensus disorder prediction 68 93 - -
Car03g02467 556 CDD RING-H2_TTC3 502 545 - -
Car03g02467 556 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 1 552 IPR045191 GO:0061630
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02467 Car-Chr3 70455055 70462882 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02467 1 556 C3H Transcription Factor Family AT2G37150 42.732 1.65e-114 349
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02467 - - gmx:100803627 910.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02467 03 70455055 70462882 Car03g02467 03 70455055 70462882 ECH