Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02458 ATGGGGAAGAAGGGAAATTGGTTTTCTACAGTGAAGAAAGCACTCAGCCCTGACTCAAAGAAATCAAGTAAGTCAAAGAAGAAATGGTTTGGGAAGCAAAAATTGCAAACCTCAGATCCTTGCTTAGAAACTGATACCACGCCACCTCTTCCACCAGCAGAAGATATTAAATTAACTGATATTGAAAATCAAAACAGTCACCATCATGTTGCTGAAATAACAACTGCCATAGATGCCGAGGAACCTGTTCCTTCTGTTCAGACAACGGTTGTTAGGACAGAAGCTGCTGCAGTTGCTCGTTTTGCTGGTAAACCAAAGGATGAAGTGGCAGCAATCAAGATTCAGACAGCTTTTCGGGGATACTTGGCAAGAAGAGCGTTGCGGGCTTTAAGAGGGCTGGTCAGATTGAAAACGTTGATGGAAGGGCCCATTGTAAAACGGCAAGCCGTGAGTACCCTTCGCTCGATGCAGACGTTAGCTCGTGTGCAATCTCAGATTCGTTCTAGGAGGGTCAGAATGTTAGAGGAGAATCAGGCTCTGCAGAAACAGCTCTTACAGAAGCATGCAAGGGAGCTTGAGACCATGCGGATTGGGGAGGAATGGGATGATAGCCTACAATCAAGAGAACAAATTGAAGCCAAATTACTGAGCAAGTATGAGGCTACTATGAGAAGAGAAAGGGCACTGGCTTATGCATTCACTCATCAGCAAAACGGGAAGAACACGTCTAGATCGATGAATCCAATGTTCACGGATCCAACCAATCCTGCATGGGGCTGGAGCTGGTTAGAACGATGGATGGCAGCCCGACCTTGGGAGAGCCGTGGCCTTGTGGATAAAGAACTAAATGATCATTCATCTGTTAAAAGTTCAAGTCGCAGCATTACCGGTGGAGAAATCAGCAAATCATTTGCTCGTTTCCAGCTCAATTCTGAAATACATTCTCCAGCAGCGAGCCAAAACCCCGGCTCACCTAGCTTTCAATCCAATTCAGCTCCTTCAAAGCCAGGTTCTGCAGCAGTTGCTAGGAAACTGAAGAAGGCAAGTCCAAAGGGAAGCTGGGTTATGGATGATGACTCCAAAAGCATGGCCAGTGTACAATCAGATCGGTTCCGTAGGCACTCTATTGCCGGATCAACAATTAGAGATGACGAGAGCCTTGCTAGCTCTCCATCAGTTCCAAGTTATATGGTGCCAACTCAATCAGCGAAAGCTAGGTCAAGGACACAAAGTCAAAGTCCCCTAGCAAAAGAAAATGGCAAACAAGAAAAGGGGTCCTTTGGAACAGCAAAAAAGCGTCTTTCTTTTCCGGCTTCACCCGCCAAGCCAAGGCGTCATTCAGGTCCGCCAAAGGTAGAAATCACCGTAAATGCCGAGTTCACTGTGGACAATGGTGTGACCAGTTGA 1407 0.4641 MGKKGNWFSTVKKALSPDSKKSSKSKKKWFGKQKLQTSDPCLETDTTPPLPPAEDIKLTDIENQNSHHHVAEITTAIDAEEPVPSVQTTVVRTEAAAVARFAGKPKDEVAAIKIQTAFRGYLARRALRALRGLVRLKTLMEGPIVKRQAVSTLRSMQTLARVQSQIRSRRVRMLEENQALQKQLLQKHARELETMRIGEEWDDSLQSREQIEAKLLSKYEATMRRERALAYAFTHQQNGKNTSRSMNPMFTDPTNPAWGWSWLERWMAARPWESRGLVDKELNDHSSVKSSSRSITGGEISKSFARFQLNSEIHSPAASQNPGSPSFQSNSAPSKPGSAAVARKLKKASPKGSWVMDDDSKSMASVQSDRFRRHSIAGSTIRDDESLASSPSVPSYMVPTQSAKARSRTQSQSPLAKENGKQEKGSFGTAKKRLSFPASPAKPRRHSGPPKVEITVNAEFTVDNGVTS 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02458 468 MobiDBLite consensus disorder prediction 1 51 - -
Car03g02458 468 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 1 464 - -
Car03g02458 468 MobiDBLite consensus disorder prediction 382 419 - -
Car03g02458 468 Gene3D - 85 138 - -
Car03g02458 468 MobiDBLite consensus disorder prediction 315 336 - -
Car03g02458 468 ProSiteProfiles IQ motif profile. 107 135 IPR000048 GO:0005515
Car03g02458 468 Pfam Protein of unknown function (DUF4005) 383 448 IPR025064 -
Car03g02458 468 SMART iq_5 106 128 IPR000048 GO:0005515
Car03g02458 468 Pfam IQ calmodulin-binding motif 110 128 IPR000048 GO:0005515
Car03g02458 468 MobiDBLite consensus disorder prediction 315 468 - -
Car03g02458 468 PANTHER IQ-DOMAIN 5-RELATED 1 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02458 Car-Chr3 70385751 70389917 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02458 1 468 IQD Protein Family AT5G03040 52.546 7.16e-143 415
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02458 - - gmx:100800080 673.315
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02458 03 70385751 70389917 Car03g02458 03 70385751 70389917 ECH
Car03g02458 03 70385751 70389917 Car04g01843 04 19637267 19641019 PCT