Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02449 ATGTTGGATCTCAATCTCAACGCCGATTCCGCTTTCGATAACTACACTCTTCCACTCTCTGCCGCTCAGATGGAAAGCTCCGGCAGCTTTGATTCCTCCGTCGTCAACACTGCCGACACTGAAGATTCCTGTTCTTACGGCGATGCATATGCTTACAACTTCGCCATACTCAACAACAACAGTACAATCGACAACGCTACTATCTCCGGTGAACTTCAACTCTCCACCGCCGGAGAAGCTGGTGTACGGACTATTCAGCTTTTTCCGGCAAATGAAACGGGAATCTCGCCTTCCGAAAGTGAAGGATGGTTGAAGTTCTCGTCGGATCATCACGGTGGTGTGCCGGAGCAGACTGTTGTTGCTCCACGACCACAGCAGGTGAAAAAGAGTCGTCGGGGACCGAGGTCAAGAAGTTCGCAGTATCGTGGCGTTACTTTCTACCGGAGAACAGGAAGATGGGAGTCGCATATTTGGGATTGTGGGAAACAAGTGTACTTAGGTGGATTTGACACTGCTCATGCTGCAGCAAGGGCATATGATCGAGCTGCAATCAAGTTCCGTGGTGTTGATGCGGATATCAATTTCAACGTTAGCGATTATGATGATGATATAAAGCAGATGAGTAACTTTACAAAGGAAGAGTTTGTGCATATTCTGCGTAGACAGAGCACTGGTTTCTCAAGAGGAAGCTCCAAATACAGGGGAGTTACTCTGCATAAATGTGGGCGATGGGAAGCTCGTATGGGACAGTTTCTTGGGAAAAAATATATATATCTTGGGCTGTTTGATAGCGAACTAGACGCAGCAAGAGCGTATGATAAGGCTGCTATAAAATGCAATGGAagggaagcagtaactaattttgaggccagctcttatgaaggggagttactttcccagtctgataataaagatggcaagcggaatcttgatctgaatttgggtatagctcctccttctaactctgatgaccaaatgatgaACATGCACCACAGCGGAAGTGGTTTACAAGTTCAGCGTAGCTGGGATGATATGCCTGTTGATAAGAGTGTTATGTTTGAGGACTCTGGGTCAATATCACTTAATGGTCAGCCATCTTACGGCTTTTCCATGCCATCCAATTTATTTCCCATGTGTAAGGAAAGAGCAATAGAGAATAGGATGGAAGCTGCTTCAGTGCCAAAATGGGCATGGCAACTCCAAAGTCCTTATAATGGGTCAACTTTGATTCCACCTTTCTCTGCTGCTGCAGCATCATCAGGATTCCCTTCACCAACTACAGTACCATCATCAGCTGCGGATAGTCAAATTCATTATCCAAACATGACCTTCCTCCACCCTCATTTTCCTCCTCCAATGACTAACTCCACCAACATATCCCCTTTCTACTGCAGGAGCTGA 1401 0.4183 MLDLNLNADSAFDNYTLPLSAAQMESSGSFDSSVVNTADTEDSCSYGDAYAYNFAILNNNSTIDNATISGELQLSTAGEAGVRTIQLFPANETGISPSESEGWLKFSSDHHGGVPEQTVVAPRPQQVKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVDADINFNVSDYDDDIKQMSNFTKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQFLGKKYIYLGLFDSELDAARAYDKAAIKCNGREAVTNFEASSYEGELLSQSDNKDGKRNLDLNLGIAPPSNSDDQMMNMHHSGSGLQVQRSWDDMPVDKSVMFEDSGSISLNGQPSYGFSMPSNLFPMCKERAIENRMEAASVPKWAWQLQSPYNGSTLIPPFSAAAASSGFPSPTTVPSSAADSQIHYPNMTFLHPHFPPPMTNSTNISPFYCRS 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02449 466 MobiDBLite consensus disorder prediction 114 141 - -
Car03g02449 466 Pfam AP2 domain 140 188 IPR001471 GO:0003700|GO:0006355
Car03g02449 466 Pfam AP2 domain 231 281 IPR001471 GO:0003700|GO:0006355
Car03g02449 466 ProSiteProfiles AP2/ERF domain profile. 140 196 IPR001471 GO:0003700|GO:0006355
Car03g02449 466 PRINTS Ethylene responsive element binding protein signature 233 244 IPR001471 GO:0003700|GO:0006355
Car03g02449 466 PRINTS Ethylene responsive element binding protein signature 271 291 IPR001471 GO:0003700|GO:0006355
Car03g02449 466 CDD AP2 231 291 IPR001471 GO:0003700|GO:0006355
Car03g02449 466 Gene3D AP2/ERF domain 139 198 IPR036955 GO:0003700|GO:0006355
Car03g02449 466 Gene3D AP2/ERF domain 231 290 IPR036955 GO:0003700|GO:0006355
Car03g02449 466 SMART rav1_2 140 202 IPR001471 GO:0003700|GO:0006355
Car03g02449 466 SMART rav1_2 232 295 IPR001471 GO:0003700|GO:0006355
Car03g02449 466 PANTHER AP2 DOMAIN TRANSCRIPTION FACTOR 1 460 - -
Car03g02449 466 SUPERFAMILY DNA-binding domain 139 198 IPR016177 GO:0003677
Car03g02449 466 CDD AP2 140 198 IPR001471 GO:0003700|GO:0006355
Car03g02449 466 ProSiteProfiles AP2/ERF domain profile. 232 289 IPR001471 GO:0003700|GO:0006355
Car03g02449 466 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1 460 - -
Car03g02449 466 SUPERFAMILY DNA-binding domain 231 290 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02449 Car-Chr3 70298003 70300638 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02449 119 329 AP2-EREBP Transcription Factor Family AT4G36920 77.103 1.52e-96 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Car03g02449 AP2 1.1e-08 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02449 K09284 - gmx:100808212 635.95