Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02444 ATGATGGATATTGAGGAAGCAGAAAGGGTAGTTGTTGCCAAACCAATTGCTTCAAGACCTACTTGTTCTACTTACAATTCTTTCTCAGAGCTCTTAGCCGGTGCAGTCAATGCCACTCCCTCCATTGCATCTTCTCAAACTACAATTTCTGCCATTAGGCCAAAGACAGTGAGGTTCAAGCCAGCAGTGAATCTCACCCCTGCTAAGTCTATTTTTTCTCAGGCTGAATTTTTTGGAGGTGCACTTAGCAATTCTACTGACATGGATCCCAAACCTGACACCAATCACTCTCTCATATACAAGCCAATGGCAAAATTTGTGTCACAAACAACTGTCTCTCTCTTGGCAAATATGGGAATTTGCAATACTAGTCAACAGCAAACACAACAATCAATGGAAGACAATCTTCAGCATCAAAACCATGACAAGCTTAGAGCCAATATGAGCTCAAATATTCATCAGAACACTACCCTTCCTATAGAAACATACCATGCCACTGAACCTTGTAAGATGACACAGCAGAACATGGAGGAAGACCAAAAAGCTTTAACATCCACAACTAGTGCTGATAGACCTTCTTATGATGGATACAACTGGAGGAAATATGGGCAGAAGCAAGTAAAGGGAAGCGAATATCCTCGAAGTTATTACAAGTGCACACATCCTAATTGTCCAGTTAAAAAGAAAGTTGAAAGATCATATGATGGAGAGATTGCAGAAATTGTTTATAAAGGTGAACACAACCATGCAAAGCCGCAGCTTCAAAAGCGAAACTCAGGAGGGACACAAGGATCAGGAATGGTGTCTGATGGAATGGTTCAAGATATATGGAATGAAGGCAGAATAGAGACCCAGAATGATTCTGCTTATCATGTCAAAGCTACACAGCCTAATAATGATTCTGCTCTAATTGGTCATATTAATGTTGGTGGAGGGAGCATAGAAAATTCTTGTGGTCTAAGTGGGGAATGTGAGGAAGGAAACAAAGGATTTGAGGCAGAGGAAGATGATCCTAGAAGTAAAAGAAGGAAAAATGAGAATCAATCCAACGAAACAGCAGTATCAGAGGAAGGTTTAGTAGAGCCGCGCATTGTGACACAAAGTTCTGCAGATTCTGAAATCCTTGGCGATGGCTTTCGCTGGAGGAAATATGGTCAAAAAGTTGTAAAGGGAAATCCATATCCCAGAAGTTACTATAGATGTACTAATATAAAGTGTAATGTTCGCAAGCATGTGGAGAGAGCAATAGATGATCCAAAATCATTTGTGACAACATATGAAGGAAAGCACAACCATGAGATGCCACTCAAGAACACAGTAACTGTGGCCTCTGAAAAAGATTCACAAGCTTCTCTTAGTAAAGATAAACCATATTGA 1377 0.4031 MMDIEEAERVVVAKPIASRPTCSTYNSFSELLAGAVNATPSIASSQTTISAIRPKTVRFKPAVNLTPAKSIFSQAEFFGGALSNSTDMDPKPDTNHSLIYKPMAKFVSQTTVSLLANMGICNTSQQQTQQSMEDNLQHQNHDKLRANMSSNIHQNTTLPIETYHATEPCKMTQQNMEEDQKALTSTTSADRPSYDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCPVKKKVERSYDGEIAEIVYKGEHNHAKPQLQKRNSGGTQGSGMVSDGMVQDIWNEGRIETQNDSAYHVKATQPNNDSALIGHINVGGGSIENSCGLSGECEEGNKGFEAEEDDPRSKRRKNENQSNETAVSEEGLVEPRIVTQSSADSEILGDGFRWRKYGQKVVKGNPYPRSYYRCTNIKCNVRKHVERAIDDPKSFVTTYEGKHNHEMPLKNTVTVASEKDSQASLSKDKPY 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02444 458 PANTHER WRKY TRANSCRIPTION FACTOR 44 8 438 - -
Car03g02444 458 SUPERFAMILY WRKY DNA-binding domain 191 252 IPR036576 GO:0003700|GO:0006355|GO:0043565
Car03g02444 458 MobiDBLite consensus disorder prediction 332 350 - -
Car03g02444 458 Pfam WRKY DNA -binding domain 195 249 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car03g02444 458 Pfam WRKY DNA -binding domain 377 433 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car03g02444 458 Gene3D WRKY domain 177 253 IPR036576 GO:0003700|GO:0006355|GO:0043565
Car03g02444 458 Gene3D WRKY domain 361 436 IPR036576 GO:0003700|GO:0006355|GO:0043565
Car03g02444 458 MobiDBLite consensus disorder prediction 429 458 - -
Car03g02444 458 MobiDBLite consensus disorder prediction 246 269 - -
Car03g02444 458 SUPERFAMILY WRKY DNA-binding domain 371 435 IPR036576 GO:0003700|GO:0006355|GO:0043565
Car03g02444 458 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 8 438 IPR044810 GO:0003700
Car03g02444 458 ProSiteProfiles WRKY domain profile. 188 252 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car03g02444 458 MobiDBLite consensus disorder prediction 325 361 - -
Car03g02444 458 ProSiteProfiles WRKY domain profile. 370 435 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car03g02444 458 SMART WRKY_cls 193 251 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car03g02444 458 SMART WRKY_cls 375 434 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car03g02444 458 MobiDBLite consensus disorder prediction 254 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02444 Car-Chr3 70268642 70272576 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02444 89 436 WRKY Transcription Factor Family AT2G37260 43.883 5.50e-85 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Car03g02444 WRKY 6.6e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02444 - - gmx:100794069 699.123