Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02443 ATGGGTTGGATTCCATGTTCTGGAAATTCAGGCACTAAGAAGAAGATTGTGAAGATGGAAGTTCAACACAGTCTCACTCGTCAGATTAAACCTACCCCAGGGAAATTGAAGAGGAATTCATCAACAAATTCCAAGGATACATCTAAAAATGGGAATGCTGAACACATTGCAGCACAGACTTTCGCATTCCGCGAGTTGGCAAATGCAACTAGAAACTTTAGAGCGGATTGTCTTTTGGGGGAGGGAGGCTTTGGTAGAGTATACAAAGGACGTCTCGAAAGTATTAACCAGGTTGTCGCAATCAAGCAACTTGACCGAAATGGACTccaaggaaatagggaattccttgttgaagtgttgatgttaagtctacttcatcaccataaccttgtcaaccttattggttattgtgctgatggagatcaaaggcttctagtttatgaatatatgccatatggatccttagaAGACCACTTGCATGATATATCTCCTGGCAAGAAACGACTTGACTGGAACACGCGAATGAAAATAGCTGCTGGAGCAGCAAAGGGATTAGAATATCTACACGACCAAGCTAATCCTCCGGTCATATACCGAGATTTGAAGTGCTCAAACATTTTGCTTGGTGAAGGGTATCATCCAAAGTTATCTGATTTTGGTTTGGCCAAACTCGGCCCGGTTGGAGAAAACACTCATGTATCAACAAGGGTTATGGGCACTTATGGATATTGTGCTCCAGAGTACGCCATGACCGGTCAACTCACTCTCAAATCAGATGTTTATAGTTTTGGTGTAGTTCTTCTCGAAATAATTACAGGAAGGAAAGCGATTGACAATTCAAAATCTACAGCAGAACAGAACCTTGTTGCATGGGCTAGACCCTTGTTCAAAGATAGAAGGAAATTTTCGCAAATGGCCGATCCTATGCTTCAAGGTCAGTATCCTTCAAGAGGACTATACCAGGCCCTTGCTGTTGCAGCAATGTGTGTTCAGGAACAAGCGAATATGCGTCCGGTTATAGCTGATGTTGTCACAGCTTTGTCTTACCTTGCTTCGCAAAGATACGATCACAATATACAGTCAAACTCTCGCCTAGCTCCTGGTACTCCTCCAAGAACCAGGAGAAGGCAATGA 1134 0.3818 MGWIPCSGNSGTKKKIVKMEVQHSLTRQIKPTPGKLKRNSSTNSKDTSKNGNAEHIAAQTFAFRELANATRNFRADCLLGEGGFGRVYKGRLESINQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHHNLVNLIGYCADGDQRLLVYEYMPYGSLEDHLHDISPGKKRLDWNTRMKIAAGAAKGLEYLHDQANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGENTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIITGRKAIDNSKSTAEQNLVAWARPLFKDRRKFSQMADPMLQGQYPSRGLYQALAVAAMCVQEQANMRPVIADVVTALSYLASQRYDHNIQSNSRLAPGTPPRTRRRQ 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02443 377 Gene3D Phosphorylase Kinase; domain 1 42 149 - -
Car03g02443 377 PANTHER OS07G0668900 PROTEIN 1 376 - -
Car03g02443 377 ProSitePatterns Serine/Threonine protein kinases active-site signature. 196 208 IPR008271 GO:0004672|GO:0006468
Car03g02443 377 ProSiteProfiles Protein kinase domain profile. 73 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g02443 377 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL7-RELATED 1 376 - -
Car03g02443 377 MobiDBLite consensus disorder prediction 27 51 - -
Car03g02443 377 Gene3D Transferase(Phosphotransferase) domain 1 150 366 - -
Car03g02443 377 CDD STKc_IRAK 79 347 - -
Car03g02443 377 Pfam Protein tyrosine and serine/threonine kinase 78 345 IPR001245 GO:0004672|GO:0006468
Car03g02443 377 SMART serkin_6 73 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g02443 377 SUPERFAMILY Protein kinase-like (PK-like) 56 347 IPR011009 -
Car03g02443 377 ProSitePatterns Protein kinases ATP-binding region signature. 79 102 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02443 Car-Chr3 70264609 70267152 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02443 33 352 Glycoside Hydrolase AT3G07070 67.188 1.12e-163 463
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Car03g02443 PK_Tyr_Ser-Thr 5.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02443 - - gmx:100818024 674.085
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02443 03 70264609 70267152 Car04g01825 04 19388505 19393479 PCT