Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02432 ATGCAATTGCAACCTATGAACAACATGCTTCCTTTCTTCAACCAATCAATGGAGCTTGTTCAACTCCCCAAGCCACTTAGAACCAGAACCCATCTCTCTCCTACGCTAGGGGAACTCCTCAAACGCGTCGAAGATGCTCAAAACGACAGCACCAATCCTCAACCACATCATGTTCTCGACCTAtcctcctcttcctcttcctccaccacccttccaccACACCCTTTTTTCCTTTCTTTCTCAAACTTAACTTACAGCGTCAAACTCCACCAAAAGATGACTTTCTCCCCACGCTTTTCCTCTAACCAAAATTCCCAACCAACTGATATTCCCGAAGCCGAAACCAAACCAAACGGCACCAAAATTCTCCTAAACAACATATCCGGCGAAGCAAGAGACGGAGAAGTCATGGCAGTTCTTGGTGCAAGCGGCTCCGGCAAATCAACACTCATCGACGCACTCGCTGATAGAATTTCCAAAGACAGCCTCAAAGGAACAATAACTCTAAACGGCGACGTTTTAGAGTCCAGTCTCCAAAAAGTAATTTCAGCTTACGTCATGCAAGACGATCTTCTCTTTCCCATGCTCACCGTCGAAGAAACTCTCATGTTCTCCGCCGACTTCAGACTCCCTCGATCTCTCTCAAAATCAAAGAAGAAAGCACGCGTTCAAGCACTCATCGACCAGCTCGGTCTCCGCTCCGCCGCATCAACCGTAATCGGAGACGAAGGTCACCGCGGCGTCTCCGGCGGAGAACGCCGCCGTGTTTCAATCGGAACAGACATCATCCACGATCCAATCATTTTATTTTTAGACGAACCAACCTCCGGTCTGGACTCGACCAGCGCATACATGGTGGTGAAGGTGTTACAGCGAATTGCTCAAAGCGGAAGCATCGTGATCATGTCCGTTCATCAACCAAGCTACAGAATCCTCGGTTTACTTGACCGTTTAATCTTCCTCTCTCACGGTCAAACCGTCTACAGCGGTTCTCCGGCGAACCTCCCTCTCTTCTTCTCTGAATTCGACCATCCCATACCGGAAAACGAGAACCGCACGGAATTCGCACTTGACCTAATCCGCGAACTCGAAGGAACTCCCGGAGGAACAAAAAGCCTAGTGGAGTTCAACAAATCATGGCAGTTAAAAAACAAACCAGTGCCACCTTTAAATAACGGAGCGAAACTGTCGTTAAAAGAAGCTATAAGCGCGAGTATCTCAAGAGGGAAATTAGTATCAGGAACTAACGGAGCaaacggaaacggaaacggaaacgcaacggaTTCAATTGCCACGTTTGCAAATCCGTTTTGGATTGAAATGGCGGTTATTGGAAAACGGTCTCTAACAAACTCAAGGCGGATGCCTGAATTATTCGGAATCCGTTTAGGTGCAGTTCTTGTAACCGGAGGAATCTTAGCTACAATCTTCTACCGTCTCGACAATTCTCCAAAAGGTGTTCAAGAGCGTTTAGGTTTCTTCGCATTCGCCATGTCAACAACCTTCTACACTTGTGCTGAAGCCATTCCCGTTTTCCTTCAAGAGCGTTACATTTTCATGAGAGAAACCGCCTACAACGCTTACCGTCGTTCCTCCTATGTTCTCTCTCACTCCATTATATCCCTCCCTTCTCTCATCTTCCTCTCCTTCGCCTTCGCCATCACCACTTTCTGGTCTGTCGGACTCGCCGGTGGAACATCCGGTTTTCTCTTTTACTTTTTCACTATCCTAGCTTCCTTCTGGGCAGGAAGCTCCTTTGTGACGTTCCTCTCCGGCGTCGTTTCACATGTGATGCTAGGTTTCACTGTTGTGGTTGCTATTTTGGCTTATTTTCTTCTCTTCAGTGGATTCTTCATAAGCAGGAATAGGATTCCACCATACTGGATATGGTTCCATTATCTATCACTAGTGAAGTATCCTTATGAAGGAGTGCTTCAGAATGAGTTTGATATTCAACCACCGAGGTGCTTTGTGAGGGGGATTCAGATGTTTGATAACACGCCGCTTGGCGATGTACCGGGGAGTTTGAAGGTGGAACTGTTGAAGAGTTTGAGTAGTACGTTGGGGATTAACATAACGAGCTCTACATGTGTTGTTACTGGAGCGGATATACTGAAGCAACAGGGGATTACGCAGCTTAGCAAATGGAACTGCTTGTTTATTACTATTGCTTGGGGATTCTTCTTTCGATTCCTCTTTTACTTGGCTTTGCTATTTGGAAGCAAGAACAAGAGGAAGTAA 2241 0.4507 MQLQPMNNMLPFFNQSMELVQLPKPLRTRTHLSPTLGELLKRVEDAQNDSTNPQPHHVLDLSSSSSSSTTLPPHPFFLSFSNLTYSVKLHQKMTFSPRFSSNQNSQPTDIPEAETKPNGTKILLNNISGEARDGEVMAVLGASGSGKSTLIDALADRISKDSLKGTITLNGDVLESSLQKVISAYVMQDDLLFPMLTVEETLMFSADFRLPRSLSKSKKKARVQALIDQLGLRSAASTVIGDEGHRGVSGGERRRVSIGTDIIHDPIILFLDEPTSGLDSTSAYMVVKVLQRIAQSGSIVIMSVHQPSYRILGLLDRLIFLSHGQTVYSGSPANLPLFFSEFDHPIPENENRTEFALDLIRELEGTPGGTKSLVEFNKSWQLKNKPVPPLNNGAKLSLKEAISASISRGKLVSGTNGANGNGNGNATDSIATFANPFWIEMAVIGKRSLTNSRRMPELFGIRLGAVLVTGGILATIFYRLDNSPKGVQERLGFFAFAMSTTFYTCAEAIPVFLQERYIFMRETAYNAYRRSSYVLSHSIISLPSLIFLSFAFAITTFWSVGLAGGTSGFLFYFFTILASFWAGSSFVTFLSGVVSHVMLGFTVVVAILAYFLLFSGFFISRNRIPPYWIWFHYLSLVKYPYEGVLQNEFDIQPPRCFVRGIQMFDNTPLGDVPGSLKVELLKSLSSTLGINITSSTCVVTGADILKQQGITQLSKWNCLFITIAWGFFFRFLFYLALLFGSKNKRK 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02432 746 MobiDBLite consensus disorder prediction 97 117 - -
Car03g02432 746 Pfam ABC-2 type transporter 443 649 IPR013525 GO:0016020|GO:0140359
Car03g02432 746 Gene3D - 114 337 IPR027417 -
Car03g02432 746 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 118 335 IPR027417 -
Car03g02432 746 SMART AAA_5 133 348 IPR003593 -
Car03g02432 746 MobiDBLite consensus disorder prediction 47 67 - -
Car03g02432 746 Pfam ABC-2 type transporter 305 385 IPR043926 GO:0140359
Car03g02432 746 PANTHER ABC TRANSPORTER G FAMILY MEMBER 16 33 739 - -
Car03g02432 746 Pfam ABC transporter 124 276 IPR003439 GO:0005524
Car03g02432 746 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 33 739 - -
Car03g02432 746 ProSitePatterns ABC transporters family signature. 248 262 IPR017871 GO:0005524
Car03g02432 746 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 105 348 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02432 Car-Chr3 70194368 70197167 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02432 123 308 Calmodulin-binding Proteins AT2G36910 28.571 3.41e-10 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02432 K05681 - gmx:100781319 1117.06