Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02407 ATGACGTCATTTTTGAAGCCTGAGAATGCCCTCAAGAGGGCAGAAGAGTTAATCAATGTCGGGCAGATGCAGGATGCTCTTCAGACTCTTCACGACCTAATCACTTCGAAAAGATACAGGGCATGGCAGAAAACACTTGAAAGAATTATGTTTAAGTATGTAGAGCTTTGTGTTGTCATGCGGAAAGGACGGTTTGCAAAGGATGGGCTAATTCAGTATCGTATAATATGTCAGCAAGTGAATGTTAGCTCACTTGAGGAGGTGATTAAGCATTTCATGCACCTGTCAACCGAGAAAGCTGAACAAGCCCGTAGCCAGGCTCAAGCATTGGAAGAAGCCCTTGATGTTGATGACTTAGAGGCTGATAAAAGGCCGGAGGACTTGATGCTGAGCTATGTCAGTGGTGAGAAAGGAAAGGACAGATCTGACAGGGAGCTTGTTACCCCGTGGTTTAAATTTCTTTGGGAAACTTACAGGACTGTGCTTGAAATATTGCGGAACAACTCAAAGTTGGAAGCCTTATATGCGATGACAGCCCATCGAGCTTTCCAGTTTTGTAAGCAGTATAAACGAACAACGGAATTTCGAAGACTCTGTGAAATCATCCGAAACCATTTGGCTAATCTTAACAAATATCGGGACCAACGAGACCGTCCTGATCTTTCTGCTCCTGAAAGCATGCAATTGTATCTTGATACAAGATTTGAGCAGCTGAAAATTGCCACTGAACTTGAACTCTGGCAGGAAGCTTTCCGATCCGTTGAAGATATACATGGACTAATGTGCATGGTCAAGAAAACACCGAAACCATCCTTGATGGTGGTTTACTATGTTAAGTTGACCGAAATATTTTGGAAATCATCCAGTCATTTATACCATGCATATGCTTGGTTCAAGCTATTTTTGTTACAAAAGACCTTCAACAAGAATCTGAGTCAGAAGGATTTGCAATTAATAGCTTCTTCCGTTGTTCTAGCTGCGCTTTCAGTTCCTCCTCATGATCATACTCATGGTGCCTCTCATTTAGAACTAGAGCATGAAAAGGAGCGAAATTTGAGGATGGCAAATCTCATAGGCTTTAATCTTGAAACCAAGCCTGAGAGCAGAGAAGTGGTACGTTACTTCATTTGCACTATTGTGGTAGCATCAAAGGGTGTAATGTCATGTGTTGCTCAAGAAATTAAGGACATTTACTATCTTTTGGAACACGAGTTTCTACCCGCGGATCTTGCACTTAAAGTACAACCCTTGCTAAACAAAATTGCTAAATTAGGGGGTAAGTTTTCCTTTGCATCATCTGTTCCAGAGGTGCAATTGTCGCAGTATGTACCAGCACTTGAGAAGTTAGCTACCTTGAGGTTGTTACAACAGGTATCTAATGTGTACCAGACGATGAAGATTGAGAACTTAGCTGGGATGATCCCCTTCTTTGATTTTTCCATAGTCGAAAAGATTTCTGTGGATGCTGTTAAGCAGAAATTTCTATCCATGAAAGTTGACCACATGAAAAATGTTATAATTTTCTGTAAGACGAGTCTTGAGGCTGATGGCTTAAGGGATCACTTGGCCAGTTTTGCTGAACAATTGAATAAGGCAAGACAAATGATTTGTCCTCCGGATAGGAAACAATCAAAACTTGGAACTATGCTCCCGACATTGTCAGAGGTGGTGGCCAAAGAACACAAGAGGCTCCTTGCTCGAAAATCAATTATTGAGAAGAGGAAAGAAGAGCAAGAACGACAGCTTCTTGAAATGGAACGCGAGGAGGAATCAAAGAGGTTAAGGCTGCAGAAAATTACAGAAGAAGCAGAGCAAAGGAGGCTTGCAACTGAGTACGAGCAGAGGAAGAATCAAAGGATTCTCAGGGAAATTGAGGAAAGAGAAAATGAAGAGGCTCAGGCTTTACTTCAGGAAGCTGAAAAGCGTATTAAGAAAAAGGGTAAAAAGCCCATCATTGAGGGGGAGAAAATTACTAAACAGACCTTAATGGAATTGACTTTGACTGAACAACTCCGGGAAAGGCAGGAAATGGAGAAGAAACTGCAGAAATTTGCCAAAACCATGGATTATTTGGAAAGGGCAAAGAGAGAAGAGGCTGCTCCACTTATTGAAGCTGCATATCAACAGCGTCTTGTGGAAGAGAGGATTCTTCATGAGCGTGAGCAACAGCTAGAGGTTGAACTGAGCAAACAGCGCCATGCTGGAGATCTCAGTGAGAAGCAGAGGCTTATTCGAATGATGGGCAATAAAGAGATATTTCAAGAGAGAGTTGTCAATCATCGCCAAGCGGAATTTAATAGACTGAGGAAAGAAAGGGAGGAACGTATTTCTAGAATTTTACAGTCCAGGAGACAGGAGAGGGAAAAAATGAGGAAGTTGAAATATTACCTTAAGTTGGAAGAAGAGAGACAACAAAAATTGCGTGAGGAGGAAGAAGCTAAAAAGCGTGAAGAGGCTGAGAGAAAAAAGAAGGAAGACAAAGAGCGCCAAGACAAATTGGATGAGATACTTGAAATTCAGAGGCAGAGAGAGAAAGAACTTGATGAGAAGGCTCAGAAGCAAAAGAGGGAGGCATTGTTGGGCAAACCTGCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGCCTCATGAGCCTCCTGCCCGACCATTGGAGTCTGGGTctgctgctcctgctgcagctgccgcttctgcagcCCCAACTCCAGGGAAATATGTCCCTAAGTTCCGTCGAGAGAGAGTTGAAAGCTCAGGAGTTGCTCCTCCTCCAGAAGCAGATCGTTGGGGTAACAGTAGCAGTAGGGCAGATGGTGACAGATGGGGTGAGCGCAAATCCTCATTTGGATCTGGTGGGGGTAGGTCATCTTCAACTTGGTCATCTTCCAGGGGTTCTCGTTGATCATTTTATGTTCCATTTATTGCCTATGCCACTGTGGCCTTTGGGGTCTTCATGCCTGATATTGTGCTGGTTGCTCTGA 2979 0.4203 MTSFLKPENALKRAEELINVGQMQDALQTLHDLITSKRYRAWQKTLERIMFKYVELCVVMRKGRFAKDGLIQYRIICQQVNVSSLEEVIKHFMHLSTEKAEQARSQAQALEEALDVDDLEADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAHRAFQFCKQYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESMQLYLDTRFEQLKIATELELWQEAFRSVEDIHGLMCMVKKTPKPSLMVVYYVKLTEIFWKSSSHLYHAYAWFKLFLLQKTFNKNLSQKDLQLIASSVVLAALSVPPHDHTHGASHLELEHEKERNLRMANLIGFNLETKPESREVVRYFICTIVVASKGVMSCVAQEIKDIYYLLEHEFLPADLALKVQPLLNKIAKLGGKFSFASSVPEVQLSQYVPALEKLATLRLLQQVSNVYQTMKIENLAGMIPFFDFSIVEKISVDAVKQKFLSMKVDHMKNVIIFCKTSLEADGLRDHLASFAEQLNKARQMICPPDRKQSKLGTMLPTLSEVVAKEHKRLLARKSIIEKRKEEQERQLLEMEREEESKRLRLQKITEEAEQRRLATEYEQRKNQRILREIEERENEEAQALLQEAEKRIKKKGKKPIIEGEKITKQTLMELTLTEQLRERQEMEKKLQKFAKTMDYLERAKREEAAPLIEAAYQQRLVEERILHEREQQLEVELSKQRHAGDLSEKQRLIRMMGNKEIFQERVVNHRQAEFNRLRKEREERISRILQSRRQEREKMRKLKYYLKLEEERQQKLREEEEAKKREEAERKKKEDKERQDKLDEILEIQRQREKELDEKAQKQKREALLGKPAXXXXXXXXXXXGLMSLLPDHWSLGLLLLLQLPLLQPQLQGNMSLSSVERELKAQELLLLQKQIVGVTVAVGQMVTDGVSANPHLDLVGVGHLQLGHLPGVLVDHFMFHLLPMPLWPLGSSCLILCWLL 992
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02407 992 Hamap Eukaryotic translation initiation factor 3 subunit A [EIF3A]. 1 885 IPR027512 GO:0005852
Car03g02407 992 SMART PINT_4 441 532 IPR000717 -
Car03g02407 992 Gene3D UVR domain 217 268 - -
Car03g02407 992 Coils Coil 667 694 - -
Car03g02407 992 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 441 532 - -
Car03g02407 992 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT A 1 866 - -
Car03g02407 992 Coils Coil 615 649 - -
Car03g02407 992 MobiDBLite consensus disorder prediction 847 868 - -
Car03g02407 992 Gene3D - 269 342 - -
Car03g02407 992 Gene3D - 364 510 - -
Car03g02407 992 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3, THETA SUBUNIT 1 866 IPR027512 GO:0005852
Car03g02407 992 Pfam PCI domain 431 508 IPR000717 -
Car03g02407 992 Coils Coil 561 602 - -
Car03g02407 992 Coils Coil 93 120 - -
Car03g02407 992 ProSiteProfiles PCI domain profile. 293 513 IPR000717 -
Car03g02407 992 Coils Coil 796 857 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02407 Car-Chr3 69998363 70009102 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02407 1 844 Eukaryotic Initiation Factors Gene Family AT4G11420 75.948 0.0 1251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02407 K03254 - gmx:100803796 1361.28