Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02404 ATGGCGGCGTCACGGCGGCTCCGTGAGCTTCAATCCGAAGCATTAAACAAGATCTGCGTCGACTGTTCCCAAAAGAATCCACAATGGGCCTCCGTTTCCTACGGAGTCTTCATGTGTTTGGAATGCTCCGGCAAACACCGTGGCCTCGGCGTTCATATCTCATTCGTCCGATCTGTTACAATGGATTCATGGTCTGAACTCCAGATCAAGAAAATGGAATCCGGAGGTAACCGAAACCTAAATTCCTTCCTCGCTCAATATGGAATCCCTAAGGAAACCGATATTATAACTAAGTATAATTCAAATGCTGCTTCTATCTACCGCGATCGGATTCAAGCCATTGCTGAAGGACGTTCGTGGCGGGACCCACCGGTTGTTAAGGAAAATGCGAATACTCGCTCTGGAAAGGGGAAGCCGCCTCTGGCTTCGTCGAACGGTGCTGGTTGGGATGATAATTGGGATAATGATGATAGTTATGGATCTCGCGGTGATATTAGGAGGAATCAGTCTACTGGCGATGTTATGGGATTCGTTGGTGGAGGAATTTCGCCGTCGAGGTCGAAATCGACGGAGGATATTTACACCAGGACGCAATTGGAGGCTTCTGCTGCTAATAAGGAAGGATTCTTCGCAAAGAAGATGGCGGAGAATGAATCGAGACCGGATGGGATTCCGCCGTCACAGGGTGGGAAGTATGTTGGATTTGGATCTAGTCCTGCTCCTTCACAGAGAGGATCTCCTCAAAGCGATTATTTATCTGTCGTTTCTGAGGTTAAACTTTTGAATCTCCCTTTTTGTTTTTGGTTTTTTTGTTTGGGAAAAGTGATTTATTGCTTGTTGAGACATGTTTCTCTATTGTGTGTGTTTTCAGGGAATTGGAAAATTATCGATGGTTGCTCAGTCTGCCACCAAGGAGATAACTGCCAAGGTAAAGGACGGCGGTTATGA 948 0.4652 MAASRRLRELQSEALNKICVDCSQKNPQWASVSYGVFMCLECSGKHRGLGVHISFVRSVTMDSWSELQIKKMESGGNRNLNSFLAQYGIPKETDIITKYNSNAASIYRDRIQAIAEGRSWRDPPVVKENANTRSGKGKPPLASSNGAGWDDNWDNDDSYGSRGDIRRNQSTGDVMGFVGGGISPSRSKSTEDIYTRTQLEASAANKEGFFAKKMAENESRPDGIPPSQGGKYVGFGSSPAPSQRGSPQSDYLSVVSEVKLLNLPFCFWFFCLGKVIYCLLRHVSLLCVFSGNWKIIDGCSVCHQGDNCQGKGRRL 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02404 315 MobiDBLite consensus disorder prediction 216 246 - -
Car03g02404 315 CDD ArfGap_ArfGap1 3 117 - -
Car03g02404 315 MobiDBLite consensus disorder prediction 122 191 - -
Car03g02404 315 Gene3D Arf GTPase activating protein 1 133 IPR038508 -
Car03g02404 315 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD6-RELATED 1 257 IPR044519 GO:0005096|GO:0016192
Car03g02404 315 Pfam Putative GTPase activating protein for Arf 5 105 IPR001164 GO:0005096
Car03g02404 315 ProSiteProfiles ARF GTPase-activating proteins domain profile. 4 120 IPR001164 GO:0005096
Car03g02404 315 SUPERFAMILY ArfGap/RecO-like zinc finger 5 115 IPR037278 -
Car03g02404 315 SMART arf_gap_3 4 120 IPR001164 GO:0005096
Car03g02404 315 PRINTS HIV Rev interacting protein signature 35 52 IPR001164 GO:0005096
Car03g02404 315 PRINTS HIV Rev interacting protein signature 56 77 IPR001164 GO:0005096
Car03g02404 315 PRINTS HIV Rev interacting protein signature 16 35 IPR001164 GO:0005096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02404 Car-Chr3 69979265 69982910 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02404 5 91 C2H2 Transcription Factor Family AT4G21160 47.727 3.29e-21 90.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02404 K12492 - jre:108999014 410.609
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02404 03 69979265 69982910 Car03g02404 03 69979265 69982910 ECH