Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02397 atggccggaaaaggagagggaccagctatcggaatcgatctcggaaccacttactcttgcgtcggtgtttggcaacatgatcgagttgaaattattgccaacgatcaaggtaacagaaccaccccgtcttatgtcggttttactgactccgagcgtctcatcggtgacgccgcaaagaatcaagtcgccatgaaccctatcaacaccgtttttgATGCTAAGAGGTTGATTGGTCGTAGATTCAGCGATGCTTCTgttcagagtgatatgaaattgtggccatttaagatcatttctggccctgctgagaagcccatgataggtgtgaactacaagggtgaagataagcaatttgctgcagaagagatctcttccatggtacttatgaagatgCGTGAGATTGCTGAGGCCTACCTTGGCACTGCTATTAAGAATGCTGTTGTTACTGTCCCTGCTTACTTCAACGATTCTCAGCGTCAAGCTACCAAGGATGCTGGTGTCATTGCCGGTCTTAACGTGATGCGAATCATTAATGAGCCCACTGCTGCTGCCATTGCTTATGGTCTTGATAAGAAGGCCACCAGTGTTGGTGAGAAGAATGTCTTGATTTTTGACCTTGGTGGTGGTACTTTTGATGTCTCTTTGCTTACTATTGAAGAGGGTATCTTTGAGGTGAAAGCCACTGCCGGAGACACCCATCTTGGAGGTGAGGATTTTGATAATAGGATGGTTAACCACTTTGTTCAAGAGTTTAAGAGAAAGAACAAGAAAGACATTAGTGGCAACCCCAGAGCACTCAGGAGGTTGAGGACTGCTTGTGAGAGGGCGAAGAGAACTCTTTCATCAACTGCCCAGACCACCATTGAAATTGACTCTCTCTATGAGGGAATTGATTTCTATTCCCCTATTACACGTGCCAGGTTTGAGGAGCTCAACATGGATCTCTTTAGGAAATGTATGGAGCCAGTTGAGAAATGTTTGAGAGATGCTAAAATGGACAAAAAAAGTGTCCATGATGTTGTCCTTGTAGGTGGTTCAACCAGAATTCCAAAGGTTCAACAACTTCTCCAGGATTTCTTTAATGGAAAAGAGCTATGCAAGAGCATTAATCCTGATGAGGCTGTTGCTTATGGTGCTGCTGTTCAGGCTGCAATCTTGAGCGGTGAGGGCAATGAGAAGGTTCAGGATCTTCTCCTTCTCGATGTCACTCCTCTGTCTCTTGGATTGGAGACTGCTGGTGGTGTGATGACTGTCCTTATCCAGAGGAATACCACAATTCCAACAAAGAAAGAACAAGTTTTCTCAACCTATTCTGACAACCAGCCCGGTGTCTTGATCCAGGTCTTTGAAGGAGAGAGGACAAGGACTAGAGATAACAATTTGTTGGGCAAGTTTGAACTTTCTGGCATTCCTCCAGCTCCCAGAGGTGTTCCCCAGATCACCGTCTGCTTTGACATTGATGCCAATGGTATTTTGAATGTCTCTGCTGAAGACAAAACTACTGGGCAGAAGAATAAGATCACCATCACCAATGACAAGGGTAGATTGTCAAAGGAAGATATTGAAAAGATGGTTCAAGAGGCCGAGAAGTACAAATCTGAAGATGAAGAGCATAAGAAGAAGGTTGAGGCCAAAAATGCATTGGAAAACTATGCATACAACATGAGGAATACCATTAAGGATGACAAGATTGCAGGTAAACTTGATTCAGCTGACAAGAAGAAAATCGAGGACTCCATTGAGCAGGCTATCCAATGGCTAGACAGCAACCAACTTGCAGAGGCAGATGAGTTTGAGGACAAGATGAAGGAACTTGAAAGTGTCTGCAACCCTATCATTGCCAAGATGTACCAAGGGGGTGCAGGTCCTGACATGGGTGGTGCAGCAGCTGATGAAGAGTACCCTCCTTCCGGTGGAAGCGGTGCTGGCCCCAAGATAAATTTTTatggccataaagagatgttggtaggctctggtcagtcttga 1986 0.359 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDSERLIGDAAKNQVAMNPINTVFDAKRLIGRRFSDASVQSDMKLWPFKIISGPAEKPMIGVNYKGEDKQFAAEEISSMVLMKMREIAEAYLGTAIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSPITRARFEELNMDLFRKCMEPVEKCLRDAKMDKKSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIQRNTTIPTKKEQVFSTYSDNQPGVLIQVFEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEDIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTIKDDKIAGKLDSADKKKIEDSIEQAIQWLDSNQLAEADEFEDKMKELESVCNPIIAKMYQGGAGPDMGGAAADEEYPPSGGSGAGPKINFYGHKEMLVGSGQS 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02397 661 SUPERFAMILY Actin-like ATPase domain 8 191 IPR043129 -
Car03g02397 661 ProSitePatterns Heat shock hsp70 proteins family signature 2. 203 216 IPR018181 -
Car03g02397 661 PANTHER HEAT SHOCK PROTEIN 70KDA 1 628 IPR013126 GO:0005524|GO:0140662
Car03g02397 661 Gene3D Actin; Chain A, domain 4 235 318 - -
Car03g02397 661 PRINTS 70kDa heat shock protein signature 8 21 - -
Car03g02397 661 PRINTS 70kDa heat shock protein signature 36 48 - -
Car03g02397 661 PRINTS 70kDa heat shock protein signature 58 66 - -
Car03g02397 661 PRINTS 70kDa heat shock protein signature 146 166 - -
Car03g02397 661 PRINTS 70kDa heat shock protein signature 209 219 - -
Car03g02397 661 PRINTS 70kDa heat shock protein signature 337 353 - -
Car03g02397 661 PRINTS 70kDa heat shock protein signature 369 389 - -
Car03g02397 661 PRINTS 70kDa heat shock protein signature 396 415 - -
Car03g02397 661 PRINTS 70kDa heat shock protein signature 477 493 - -
Car03g02397 661 Gene3D - 546 619 IPR029048 -
Car03g02397 661 ProSitePatterns Heat shock hsp70 proteins family signature 3. 340 354 IPR018181 -
Car03g02397 661 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Car03g02397 661 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 391 545 IPR029047 -
Car03g02397 661 Coils Coil 521 541 - -
Car03g02397 661 MobiDBLite consensus disorder prediction 622 646 - -
Car03g02397 661 Pfam Hsp70 protein 9 618 IPR013126 GO:0005524|GO:0140662
Car03g02397 661 Gene3D - 71 126 - -
Car03g02397 661 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 543 624 IPR029048 -
Car03g02397 661 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 392 549 IPR029047 -
Car03g02397 661 CDD HSPA1-2_6-8-like_NBD 9 387 - -
Car03g02397 661 PANTHER HEAT SHOCK COGNATE 70 KDA PROTEIN 2-LIKE 1 628 - -
Car03g02397 661 Gene3D - 192 366 - -
Car03g02397 661 Gene3D - 10 384 - -
Car03g02397 661 SUPERFAMILY Actin-like ATPase domain 198 388 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02397 Car-Chr3 69897181 69900198 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02397 1 646 Calmodulin-binding Proteins AT3G09440 91.641 0.0 1215
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02397 K03283 - gmx:100804917 1200.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02397 03 69897181 69900198 Car03g02397 03 69897181 69900198 ECH
Car03g02397 03 69897181 69900198 Car06g03583 06 67043975 67047073 ECH