Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02396 ATGCTATGCAGAACCTGTGATGTTAAGATGATTTTCTGTTTTACAGATGCTAAGCGGTTGATTGGTCGTAGATTCAGCGATGCTTCTgttcagagtgatatgaaattgtggccatttaagatcatttctggccctgctgagaagcccatgataggtgtgaactacaagggtgaagataagcaatttgctgcagaagagatctcttccatggtacttatgaagatgCGTGAGATTGCTGAGGCCTACCTTGGCACTGCTATTAAGAATGCTGTTGTTACTGTCCCTGCTTACTTCAATGATTCTCAGCGTCAAGCTACCAAGGATGCTGGTGTCATTGCCGGTCTTAACGTGATGCGAATCATTAATGAGCCCACTGCTGCTGCCATTGCTTATGGTCTTGATAAGAAGGCCACCAGTGTTGGTGAGAAGAATGTCTTGATTTTTGACCTTGGTGGTGGTACTTTTGATGTCTCTTTGCTTACTATTGAAGAGGGTATCTTTGAGGTGAAAGCCACTGCCGGAGACACCCATCTTGGAGGTGAGGATTTTGATAATAGGATGGTTAACCACTTTGTTCAAGAGTTTAAGAGAAAGAACAAGAAAGACATTAGTGGCAACCCCAGAGCACTCAGGAGGTTGAGGACTGCTTGTGAGAGGGCGAAGAGAACTCTTTCATCAACTGCCCAGACCACCATTGAAATTGACTCTCTTTATGAGGGAATTGATTTCTATTCCCCTATTACACGTGCCAGGTTTGAGGAGCTCAACATGGATCTCTTTAGGAAATGTATGGAGCCAGTAGAGAAATGTTTGAGAGATGCTAAAATGGACAAAAAAAGTGTCCATGATGTTGTCCTTGTAGGTGGTTCAACCAGAATTCCAAAGGTTCAACAACTTCTCCAGGATTTCTTTAATGGAAAAGAGCTATGCAAGAGCATTAATCCTGATGAGGCTGTTGCTTATGGTGCTGCTGTTCAGGCTGCAATCTTGAGCGGTGAGGGCAATGAGAAGGTTCAGGATCTTCTCCTTCTCGATGTCACTCCTCTGTCTCTTGGATTGGAGACTGCTGGTGGTGTGATGACTGTCCTTATCCAGAGGAATACCACAATTCCAACAAAGAAAGAACAAGTTTTCTCAACCTATTCTGACAACCAGCCCGGTGTCTTGATCCAGGTCTTTGAAGGAGAGAGGACAAGGACTAGAGATAACAATTTGTTGGGCAAGTTTGAACTTACTGGCATTCCTCCAGCTCCCAGAGGTGTTCCCCAGATCACCGTCTGCTTTGACATTGATGCCAATGGTATTTTGAATGTCTCTGCTGAAGACAAAACTACTGGGCAGAAGAATAAGATCACCATCACCAATGACAAGGGTAGATTGTCAAAGGAAGATATTGAAAAGATGGTTCAAGAGGCCGAGAAGTACAAATCTGAAGATGAAGAGCATAAGAAGAAGGTTGAGGCCAAAAATGCATTGGAAAACTATGCATACAACATGAGGAATACCATTAAGGATGACAAGATTGCAGGTAAACTTGATTCAGCTGACAAGAAGAAAATCGAGGACTCCATTGAGCAGGCTATCCAATGGCTAGACAGCAACCAACTTGCAGAGGCAGATGAGTTTGAGGACAAGATGAAGGAACTTGAAAGTGTCTGCAACCCTATCATTGCCAAGATGTACCAAGGGGGTGCAGGTCCTGACATGGGTGGTGCAGCAGCTGATGAAGAGTACGCTCCTTCCGGTGGAAGCGGTGCTGGCCCCAAGATTGAGGAAGTGGACTAA 1785 0.4118 MLCRTCDVKMIFCFTDAKRLIGRRFSDASVQSDMKLWPFKIISGPAEKPMIGVNYKGEDKQFAAEEISSMVLMKMREIAEAYLGTAIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSPITRARFEELNMDLFRKCMEPVEKCLRDAKMDKKSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIQRNTTIPTKKEQVFSTYSDNQPGVLIQVFEGERTRTRDNNLLGKFELTGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEDIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTIKDDKIAGKLDSADKKKIEDSIEQAIQWLDSNQLAEADEFEDKMKELESVCNPIIAKMYQGGAGPDMGGAAADEEYAPSGGSGAGPKIEEVD 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02396 594 Gene3D - 136 310 - -
Car03g02396 594 ProSitePatterns Heat shock hsp70 proteins family signature 2. 147 160 IPR018181 -
Car03g02396 594 Gene3D - 15 70 - -
Car03g02396 594 ProSitePatterns Heat shock hsp70 proteins family signature 3. 284 298 IPR018181 -
Car03g02396 594 SUPERFAMILY Actin-like ATPase domain 142 332 IPR043129 -
Car03g02396 594 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 487 568 IPR029048 -
Car03g02396 594 PANTHER HEAT SHOCK PROTEIN 70KDA 12 572 IPR013126 GO:0005524|GO:0140662
Car03g02396 594 Coils Coil 465 485 - -
Car03g02396 594 PRINTS 70kDa heat shock protein signature 313 333 - -
Car03g02396 594 PRINTS 70kDa heat shock protein signature 340 359 - -
Car03g02396 594 PRINTS 70kDa heat shock protein signature 90 110 - -
Car03g02396 594 PRINTS 70kDa heat shock protein signature 421 437 - -
Car03g02396 594 PRINTS 70kDa heat shock protein signature 281 297 - -
Car03g02396 594 PRINTS 70kDa heat shock protein signature 153 163 - -
Car03g02396 594 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 335 489 IPR029047 -
Car03g02396 594 SUPERFAMILY Actin-like ATPase domain 13 135 IPR043129 -
Car03g02396 594 MobiDBLite consensus disorder prediction 564 594 - -
Car03g02396 594 PANTHER HEAT SHOCK COGNATE 70 KDA PROTEIN 2-LIKE 12 572 - -
Car03g02396 594 Gene3D - 13 328 - -
Car03g02396 594 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 336 493 IPR029047 -
Car03g02396 594 Pfam Hsp70 protein 14 562 IPR013126 GO:0005524|GO:0140662
Car03g02396 594 Gene3D Actin; Chain A, domain 4 179 262 - -
Car03g02396 594 Gene3D - 490 563 IPR029048 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02396 Car-Chr3 69890667 69892451 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02396 16 594 Calmodulin-binding Proteins AT5G02490 91.237 0.0 1071
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02396 K03283 - gmx:100804917 1064.29