Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02390 ATGGCATCACCTCAAAACTTTGGATCCAAGTTAACAGCACTTGTTGTGGATGACAATATGATCAACCGAAAGATTCATCAAAAGATGTTGAATAATTTTGGAGTGAAAACTCATGGTGTGGAAAATGGAAAAGAAGCTGTCGACATTCATTGGTATGGCCAAAAATTTGACCTAATTCTTATGGATATGGATATGCCTATCATGAATGGCATTGAGGCAACAAAGAAACTTCGTGCAATGGGAATTTGTAGCACTATTATTGGTGTGTCATCACGCTCTATGGAAGCTGAAATATTGAAATTTATGGAAGCAGGACTAGATGACTATCAAGAGAAACCTTTAGACAATTCAAAGCTTAATTCCATTCTTGATAAGGTCAAACACAATTTCATTTCCAAGTGA 402 0.3607 MASPQNFGSKLTALVVDDNMINRKIHQKMLNNFGVKTHGVENGKEAVDIHWYGQKFDLILMDMDMPIMNGIEATKKLRAMGICSTIIGVSSRSMEAEILKFMEAGLDDYQEKPLDNSKLNSILDKVKHNFISK 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02390 133 SMART REC_2 11 123 IPR001789 GO:0000160
Car03g02390 133 Gene3D - 1 131 - -
Car03g02390 133 PANTHER TWO-COMPONENT RESPONSE REGULATOR 24 4 129 - -
Car03g02390 133 SUPERFAMILY CheY-like 10 126 IPR011006 -
Car03g02390 133 PANTHER TWO-COMPONENT RESPONSE REGULATOR 4 129 - -
Car03g02390 133 CDD REC_hyHK_CKI1_RcsC-like 14 123 - -
Car03g02390 133 Pfam Response regulator receiver domain 14 123 IPR001789 GO:0000160
Car03g02390 133 ProSiteProfiles Response regulatory domain profile. 12 127 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02390 Car-Chr3 69851855 69852519 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02390 11 119 Response Regulator Gene Family AT3G04280 44.144 7.19e-26 93.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Car03g02390 Response_reg 4.3e-22 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02390 - - gmx:100794931 185.652
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02390 03 69851855 69852519 Car03g02390 03 69851855 69852519 ECH