Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02384 ATGgctgctgctgctgctgcCAATCCTATTGTTGGATCCCATGTTTGGGTGGAGGATTCTGATGAAGCTTGGATAGATGGTGAGGTCTTGGAGGTTAATGGCGATAAAATCGAAGTCCTTTGCACTTCAGGGAAGACGGTTGTTGTTAAAGCTTCCACCATTTATCATAAAGATACCGAAGTTCCACCGAGCGGAGTGGATGATATGACAAAGCTTGCGTACCTGCACGAACCTGGAGTCTTAAATAATCTAAGATCAAGATATGATATCAATGAAATTTATACTTACACTGGGAATATATTGATTGCTGTGAACCCTTTCGTTAAGCTTCCTCATTTGTATGATAGCCATATGATGGCACAATATAAAGGAGCAGCTTTTGGTGAGTTAAGTCCACATCCCTTCGCTGTTGCGGATGCAGCTTATAGGCTCATGATAAATGAAGGAATAAGCCAGTCAATATTAGTTAGTGGTGAAAGTGGAGCCGGTAAAACCGAAAGTACAAAGTTACTCATGCAATATCTTGCTTACATGGGAGGGAGAGCTGCTGTTGTTGGAAGTAGAACTGTCGAGCAAAAAGTACTCGAGTCAAATCCTGTCCTAGAAGCCTTTGGCAATGCAAAGACTGTCAGGAACAATAATTCAAGTCGTTTTGGTAAATTTGTGGAgattcaatttgatcaaaaaggaagaatttccggcgctgcgatcagaacatatctgctggaaagatcacgtgtgtgccaagtgtcagatccagagaggaattatcattgtttctacatgctctgtgctgcaCCTCCGGAGGATGCTAAGAAATACAAAGTAGGACATCCAAAAACATTTCATTATCTGAATCAATCAAATTGCTATGAGTTGGAAGGGGTTGATGAGTCGAAAGAATACAGTGCAACAAGGAGAGCGATGGATGTTGTTGGAATAAGTTCCGAGGAGCAGGATGCAATATTTCAAGTGGTTGCTGCAATTTTGCATCTTGGGAACATTGAGTTTGTGAAAGGGGAGGAGATAGATTCATCTATGCCAAAAGATGAAAAATCCAGGTTCCACCTACAGACTGCAGCCGAGCTTTTCATGTGCGATGCAAAGGCACTTGAAGATTCTCTTTGCAAACGTGTAATTGTTACTCGCGATGAAACAATTACAAAATGGTTGGATCCAGAATCTGCTGCACTCAGTCGAGATGCTTTGGCTAAGATTGTTTACACAAGATTGTTTGACTGGTTGGTTGATACAATAAATAATTCCATTGGTCAAGATCCTGAGTCAAAATCCTTAATTGGTGTGCTGGATATTTACGGTTTTGAGAGTTTCAATAATAACAGTTTTGAGCAATTTTGTATTAATTTGACCAATGAAAAGCTTCAGCAACATTTTAATCAGCATGTTTTCAAAATGGAGCAAGAAGAATACAAAAAAGAAGAAATTGATTGGAGTTACATAGAGTTTGTGGACAATCAAGATATTCTGGATCTGATTGAAAAGAAACCTGGTGGCATTATTTCTCTTTTGGACGAAGCTTGTATGTTTCCTAGATCAACTCACGAAACTTTTGCCCAAAAGCTGTATCAGACCTTCAAAGACCATAAAAGGTTTAGCAAGCCCAAATTATCACGTAGTGACTTCACAATTTGCCATTATGCTGGCGATGTCACTTATCAAACTGAGTTCTTTCTTGACAAGAACAAAGATTATGTCGTTGCAGAACACCAGGCACTTCTTTATGCTTCCAAATGTTCCTTTGTATCGGGCTTGTTTCCCCCTTCACCCGAGGAATCTTCGAAACAATCAAAGTTCTCTTCAATAGGTTCCAGATTTAAGCAACAATTGCAATCTTTACTTGAAACTTTAAGTTCCACCGAGCCACACTACATTCGATGTGTGAAGCCCAATAATCTTCTTAAGCCAGCTATTTTCGAGAATAAAAATGTTTTGCTGCAACTGCGCTGTGGGGGAGTTATGGAGGCAATCAGGATTAGCTGTGCTGGTTATCCCACAAGAAAAGTCTTCGATGAATTTGTGGATCGATTTGGCCTACTTGCTCCTGAAGCATTGAATGGAAGTTCTGATGAGGTCACTGCTTGCAAGAGGATCCTGAAGAATGTTCGACTTGAAGGTTATCAGATTGGTAAAACGAAGGTGTTTCTTCGAGCTGGTCAAATGGCAGAACTAGATATGCGTAGAAGTGAGATCTTAGGAAAGTCAGCAAGTATTATTCAGAGAAAAGTTCGCTCCTATTTGGCCCGTCGAAGTTTCATTTCGCTACGTTTGTCAGCTGTGCAGATTCAAGCTGCATGTAGAGGACAACTTGCTAGGCAAGTTTACGAGGGAATGTGCCGGGAGGCTTCTAGTCTGCTTATTCAAAGGTATTTCCGCATGCATATTGCTAGGAAAGCGTACAAAGAATTGTATGCCTCTGCTGTGTCTATCCAGACTGGTATGCGAATGATGGCTGCTCGGTGTGAGCTAAACATTAGACGGAGGACTGGTGCAGCAACTGTCATTCAGAGCCACTGCAGGAAATACTTGGCTCAACTTCATTTCACGAAATTAAAGAAGGCAACAATTGCCACACAATGTGCATGGAGAGGAAAAGCTGCAAAAGAAACAGGGGCTCTCCAAGCTGCCAAAAGTAAGCTTGAAAAGCAAGTTGAAGACCTTACATTAAGGTTGCAGCTGGAAAAACGTTTAAGGGTGGACATTGAAGAAGCAAAAGCAAAAGAAAACAAAAGATTACAGTCAACTTTGCAAGAGATGGAACTTAAGTTTAAAGAAACTAAATCACTTCTTGAAAAGGAGCAGGAGGCTACAAAAAGATTGGCGGAGAGAGCTCCTGTCATACAGGAGGTTCCAGTTGTTGACCATGCTTTGATGGAGAAGTTATGTAGCGAAAATGAGAAACTCAAGAACTTGGTGAGTTCACTGGAAAAGAAAATTGATGAAACAGAAAAAAAGTATGAAGAGGAAACCAAGGTTAGTGAAGAAAGGTTGAAGCAAGCTTTGGATGCAGAATCGAAAGTAATCCAGATGAAGACTGCTATGCAAAGGCTTGAAGAGAAATACGCAGACGTAGAATCTGCAAATCATTTTCTTCAGAAACTATCTTTGTTAAACTCGTCTGTGAAAACAACGGTGGAGAACCTCTCTACCCCTGTATCTGAGAAGTTGGAAAATGGTCACCATGTGGCAGAAGAACAAAATGTTGTTGATTCATTTGTCACACCTGTGAAACAATTTGGTGCCGAATCTAACTCAAAATTGAAGCGATCAAACAGTGAACGACATCATAGTACCTATGATTCACTTGTTAACTGTGTTAGTAAAAACATTGGGTTCAATCAtggaaagcctattgctgcatttaccatttacaaatgtattcttcactggaaatcatttgaatctgaaagaactagcgtatttgatcgccttatccagatgattggttctgcaattgagGATCAAGATGACAATAATCTTATGGCCTATTGGCTGTCAAATACATCCGCATTATTGGTTTTACTTGAACAAAACCTGAAATCTGGGAGTTCAACAAATGCAACTCCAGTTGGAAAACCAATTAATCCAACATCACTCTTTGGAAGAATGACTAAGGGTTTTCGTTCATCACCTTCTTCTGCCAACCTCGCTGCCGCTGTACGCAAAATAGAGGCCAAGTACCCTGCTTTGCTTTTCAAGCAGCAGCTCACAGCTTATTTGGAGAAAATATACGGCATCATTCGAGATAACTTGACGAAGGAGTTATCATCGATTCTTGCATTATGTATCCAGGCACCAAGAATATCGAAGGGAGTATTACGATCTGGCCGATCCTTGGGTAAAGATTCTCCAATTGTTCACTGGCAAAATATTATCGAATCCCTCAACACCCTCCTCTGTACACTCAAAGAGAACTTTGTGCCTCCAGTTCTTATTCGAAAAATCTTCAGTCAAACATTCTCATATATTAATGTGCAACTCTTCAATAGTCTTCTAGTTCGTCCCGATTGTTGTACATTCAGCAATGGGGAATATGTGAAAGCTGGATTAGCTGAATTAGAGTTGTGGTGCTGCCAAGCAAAGGAAGAGTATGCAGGGTCATCTTGGGATGAGCTCAAGCACATACGACAGGCTGTTGGATTCTTGGTTATTCATCAGAAGTATAGGATTTCCTACGACGAAATTGTTAATGATTTATGCCCTATCTTGAGTGTCCAGCAGCTATGCAAAATATGCACACTTTATTGGGATGATATCTACAATACACGAAGCGTATCACCACATGTCCTTTCAAGCATGAGGATGGACTCCAATAATGCTCAAAGTGATTCTTTCTTGTTGGATGATAGTTCCAGCATACCCTTCTCAGTGAATGACCTCTCTACATCACTACAAGGGAAGGACTTCTTAGACATGAAACCAGCAGATGCACTTCTTGAGAATCCATCTTTCCAATTTTTAAATGAGTAG 4488 0.3808 MAAAAAANPIVGSHVWVEDSDEAWIDGEVLEVNGDKIEVLCTSGKTVVVKASTIYHKDTEVPPSGVDDMTKLAYLHEPGVLNNLRSRYDINEIYTYTGNILIAVNPFVKLPHLYDSHMMAQYKGAAFGELSPHPFAVADAAYRLMINEGISQSILVSGESGAGKTESTKLLMQYLAYMGGRAAVVGSRTVEQKVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDQKGRISGAAIRTYLLERSRVCQVSDPERNYHCFYMLCAAPPEDAKKYKVGHPKTFHYLNQSNCYELEGVDESKEYSATRRAMDVVGISSEEQDAIFQVVAAILHLGNIEFVKGEEIDSSMPKDEKSRFHLQTAAELFMCDAKALEDSLCKRVIVTRDETITKWLDPESAALSRDALAKIVYTRLFDWLVDTINNSIGQDPESKSLIGVLDIYGFESFNNNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYKKEEIDWSYIEFVDNQDILDLIEKKPGGIISLLDEACMFPRSTHETFAQKLYQTFKDHKRFSKPKLSRSDFTICHYAGDVTYQTEFFLDKNKDYVVAEHQALLYASKCSFVSGLFPPSPEESSKQSKFSSIGSRFKQQLQSLLETLSSTEPHYIRCVKPNNLLKPAIFENKNVLLQLRCGGVMEAIRISCAGYPTRKVFDEFVDRFGLLAPEALNGSSDEVTACKRILKNVRLEGYQIGKTKVFLRAGQMAELDMRRSEILGKSASIIQRKVRSYLARRSFISLRLSAVQIQAACRGQLARQVYEGMCREASSLLIQRYFRMHIARKAYKELYASAVSIQTGMRMMAARCELNIRRRTGAATVIQSHCRKYLAQLHFTKLKKATIATQCAWRGKAAKETGALQAAKSKLEKQVEDLTLRLQLEKRLRVDIEEAKAKENKRLQSTLQEMELKFKETKSLLEKEQEATKRLAERAPVIQEVPVVDHALMEKLCSENEKLKNLVSSLEKKIDETEKKYEEETKVSEERLKQALDAESKVIQMKTAMQRLEEKYADVESANHFLQKLSLLNSSVKTTVENLSTPVSEKLENGHHVAEEQNVVDSFVTPVKQFGAESNSKLKRSNSERHHSTYDSLVNCVSKNIGFNHGKPIAAFTIYKCILHWKSFESERTSVFDRLIQMIGSAIEDQDDNNLMAYWLSNTSALLVLLEQNLKSGSSTNATPVGKPINPTSLFGRMTKGFRSSPSSANLAAAVRKIEAKYPALLFKQQLTAYLEKIYGIIRDNLTKELSSILALCIQAPRISKGVLRSGRSLGKDSPIVHWQNIIESLNTLLCTLKENFVPPVLIRKIFSQTFSYINVQLFNSLLVRPDCCTFSNGEYVKAGLAELELWCCQAKEEYAGSSWDELKHIRQAVGFLVIHQKYRISYDEIVNDLCPILSVQQLCKICTLYWDDIYNTRSVSPHVLSSMRMDSNNAQSDSFLLDDSSSIPFSVNDLSTSLQGKDFLDMKPADALLENPSFQFLNE 1495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02384 1495 CDD MYSc_Myo11 78 723 IPR036018 -
Car03g02384 1495 Gene3D Myosin VI head, motor domain, U50 subdomain 315 604 - -
Car03g02384 1495 Coils Coil 908 942 - -
Car03g02384 1495 PRINTS Myosin heavy chain signature 199 226 IPR001609 GO:0003774|GO:0005524|GO:0016459
Car03g02384 1495 PRINTS Myosin heavy chain signature 432 460 IPR001609 GO:0003774|GO:0005524|GO:0016459
Car03g02384 1495 PRINTS Myosin heavy chain signature 94 113 IPR001609 GO:0003774|GO:0005524|GO:0016459
Car03g02384 1495 PRINTS Myosin heavy chain signature 485 513 IPR001609 GO:0003774|GO:0005524|GO:0016459
Car03g02384 1495 PRINTS Myosin heavy chain signature 151 176 IPR001609 GO:0003774|GO:0005524|GO:0016459
Car03g02384 1495 SMART iq_5 760 782 IPR000048 GO:0005515
Car03g02384 1495 SMART iq_5 808 830 IPR000048 GO:0005515
Car03g02384 1495 SMART iq_5 785 807 IPR000048 GO:0005515
Car03g02384 1495 SMART iq_5 833 855 IPR000048 GO:0005515
Car03g02384 1495 SMART iq_5 737 759 IPR000048 GO:0005515
Car03g02384 1495 ProSiteProfiles IQ motif profile. 786 815 IPR000048 GO:0005515
Car03g02384 1495 ProSiteProfiles Myosin motor domain profile. 64 735 IPR001609 GO:0003774|GO:0005524|GO:0016459
Car03g02384 1495 ProSiteProfiles IQ motif profile. 834 863 IPR000048 GO:0005515
Car03g02384 1495 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 10 59 IPR004009 GO:0003774|GO:0005524|GO:0016459
Car03g02384 1495 Coils Coil 883 903 - -
Car03g02384 1495 Pfam Myosin head (motor domain) 66 723 IPR001609 GO:0003774|GO:0005524|GO:0016459
Car03g02384 1495 Gene3D - 669 736 - -
Car03g02384 1495 Gene3D - 13 56 IPR008989 GO:0003774|GO:0005524|GO:0051015
Car03g02384 1495 ProSiteProfiles Dilute domain profile. 1148 1445 IPR002710 -
Car03g02384 1495 Gene3D - 442 626 - -
Car03g02384 1495 ProSiteProfiles IQ motif profile. 761 790 IPR000048 GO:0005515
Car03g02384 1495 PANTHER MYOSIN 8 1493 - -
Car03g02384 1495 Coils Coil 964 1040 - -
Car03g02384 1495 SMART MYSc_2a 58 736 IPR001609 GO:0003774|GO:0005524|GO:0016459
Car03g02384 1495 Pfam DIL domain 1321 1424 IPR002710 -
Car03g02384 1495 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 789 874 IPR027417 -
Car03g02384 1495 ProSiteProfiles IQ motif profile. 740 767 IPR000048 GO:0005515
Car03g02384 1495 Pfam IQ calmodulin-binding motif 740 758 IPR000048 GO:0005515
Car03g02384 1495 Pfam IQ calmodulin-binding motif 837 854 IPR000048 GO:0005515
Car03g02384 1495 Pfam IQ calmodulin-binding motif 789 807 IPR000048 GO:0005515
Car03g02384 1495 Pfam IQ calmodulin-binding motif 764 781 IPR000048 GO:0005515
Car03g02384 1495 SMART DIL_2 1320 1427 IPR002710 -
Car03g02384 1495 PANTHER MYOSIN-14 8 1493 - -
Car03g02384 1495 Gene3D - 255 313 - -
Car03g02384 1495 CDD MyosinXI_CBD 1099 1463 IPR037975 GO:0007015
Car03g02384 1495 Gene3D Kinesin motor domain 67 665 IPR036961 -
Car03g02384 1495 Pfam Myosin N-terminal SH3-like domain 11 52 IPR004009 GO:0003774|GO:0005524|GO:0016459
Car03g02384 1495 Gene3D - 738 787 - -
Car03g02384 1495 Gene3D - 836 884 - -
Car03g02384 1495 Gene3D - 788 835 - -
Car03g02384 1495 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 37 788 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02384 Car-Chr3 69744708 69756193 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02384 8 1494 Myosins gene family AT5G43900 73.016 0.0 2263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02384 K10357 - gmx:100795648 2555.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02384 03 69744708 69756193 Car03g02384 03 69744708 69756193 ECH
Car03g02384 03 69744708 69756193 Car04g00059 04 617505 637333 PCT