Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02372 ATGGAACGTGTAAATTCAGCAAACCAATTAAGAGCACTTGTTGTAGATGATGATAGTCTTTTACGAAAAATTCATCAAGGTTTATTGAAAAGAGCTGGTGTGAAATATGAAGCAGTGAAAAATGGTAAAGAAGCTGTAGAGATTATTCGCGCTGGTCAAAGTTTTGACATTATTCTCATGGATAAGGAAATGCCTATCATGAATGGGATTCAGGCAACCAAAAAGATGCGATCAATGGGTATTCGTAGTGTGATCGTTGGAGTGTCATCATGTTCTGCAGCAGAAATACAAGAATTTATGGAAGCGGGGCTAGATGACTATCAAGTGAAGCCATTGACCATTAATGCGCTTAATTCGATTCTTGATGTTGTAAAAGCTAACAAGTATCACAGCCTTGGTGTATGA 405 0.3778 MERVNSANQLRALVVDDDSLLRKIHQGLLKRAGVKYEAVKNGKEAVEIIRAGQSFDIILMDKEMPIMNGIQATKKMRSMGIRSVIVGVSSCSAAEIQEFMEAGLDDYQVKPLTINALNSILDVVKANKYHSLGV 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02372 134 PANTHER TWO-COMPONENT RESPONSE REGULATOR 5 127 - -
Car03g02372 134 CDD REC_hyHK_CKI1_RcsC-like 13 121 - -
Car03g02372 134 Gene3D - 1 131 - -
Car03g02372 134 SMART REC_2 10 121 IPR001789 GO:0000160
Car03g02372 134 ProSiteProfiles Response regulatory domain profile. 11 125 IPR001789 GO:0000160
Car03g02372 134 SUPERFAMILY CheY-like 8 126 IPR011006 -
Car03g02372 134 PANTHER TWO-COMPONENT RESPONSE REGULATOR 24 5 127 - -
Car03g02372 134 Pfam Response regulator receiver domain 13 121 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02372 Car-Chr3 69650284 69651117 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02372 10 113 Response Regulator Gene Family AT3G04280 48.598 6.85e-27 95.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Car03g02372 Response_reg 3.4e-20 CL0304