Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02368 ATGGCCCTCAATGAAATCTTGGCTCAAAAGTTGTTTTCTTCAGGATCGTGGGATACCCTTTTCAGTGAGATCCTTGGATTGCCACTTTTGGAACTTGTGGCTATATGTACTAATTTGGCTATTCTTGTTTTGTTTCTTTTGAGGGAGGTTTTTTTGTGTGTTGGTGGAAGGTTTTGGTTTTATAAGGATAATACTGTTGTTGGAAATGCTGGTTCAATTCGTATTAGTGTTGATGGAGGAGAAAATTTTGAGGTTAGAAGAGGGACATGGTTTAATCTGTCGGTGTTGTCTTGTTTCTATGTTTTGTTGGTGCAAGTTTTGGTTTTGGGATTTGATGGCGTTGGTTTGGTTAAGGAGGAATTTGTGGTTGTGGATTTGTCTCTTCTTTTTGTGCCGTTTGTGCAGGGTTTGGTTTGGATTGTGTTGTGCTTCATTGCTCTGCATTGCAAATTCAAGGTGTCTCATAAGTTTCCAATtttgttgcgagtttcttggcttgtgttgtttgttgtttgcttgtttgGTTTATATGTTGATGGGAGAGGGTTATGGATGGAAGGTTCTAAGCACTGGCATTCTCATGTTTTTGCAAATTTCGCTGCTACCCCTGCTCTTGCCTTTTTGTGTATTGTAGCAATTAGGGGTGTTACTGGTATACAAGTTTGTAGAAACTCTGAGAATCAACAGCCATTACTTGTCAGTGAAGAAGAAGACGAAGAACCGGGGTGCCTCAAGGTTACTCCTTATAAAGATGCTGGAGTTTTTAGCTTGGCCACTCTGTCTTGGCTTAACTCATTACTTTCCATTGGTGCAAAGAGACCACTTGAGCTTAAGGACATTCCCCTCGTTGCGCCTAAAGATCGAGCCAAAACAAATTTTAAGGTTTTGAATTCTAATTGGGAGAAAATGAAGGCTGAAAACTCGTCGACACAGCCTTCATTAGCTTGGACACTTCTGAAGTCATTCTGGAAGGAGGCAGCTATTAATGCCATTTTTGCTGGCATCACTACTCTTGTGTCGTACGTAGGTCCATACATGATAAGTTACTTTGTTGATTACTTGAGTGGTATAGAGACTTTCCCTCATGAGGGGTATGTCCTTGCAGGGATATTCTTTGTTGCCAAGCTTGTCGAGACCTTCACAACAAGGCAATGGTATCTAGGAGTGGACATATTGGGGATGCATGTTAGGTCTGCTTTAACAGCGATGGTATATCAAAAGGGGCTTAGGCTATCGAGCTTGGCCAAGCAAAGTCACACGAGTGGCGAGATTGTTAACTACATGGCTATTGATGTTCAGAGAGTAGGGGACTACGCTTGGTATCTTCATGACATGTGGATGCTTCCTCTGCAGATTGTTCTAGCCCTTGCAATTTTGTATAAGAATGTTGGAATTGCATCCATTGCTACACTTGTTGCTACAATCATTTCCATTGTAGTCACCATTCCGGTGGCTCAAATCCAAGAAGAATATCAAGACAAATTAATGGCTGCTAAGGATGAAAGAATGAGAAAAACATCTGAGTGCCTAAGGAACATGAGGATTCTCAAGCTGCAGGCTTGGGAGGACAGATATCGAATAAAATTGGAGGAAATGCGTGGAGTAGAGTACAAGTGGCTTAGGAAAGCCCTATATTCTCAGGCTTTCATAACTTTCATGTTCTGGAGCTCACCTATATTCGTTTCAGCTGTCACTTTTGCTACTTCCATATTGTTGGGCAGTAAGCTAACTGCAGGCAGTGTACTTTCTGCTCTAGCTACTTTCAGGATTCTCCAAGAACCTTTGAGGAATTTTCCAGACTTGGTATCTACAATGGCTCAGACAAAAGTTTCTCTTGATCGATTATCTTGTTTCCTGCTGGAAGAAGAATTGCAGGAAGATGCAACTATAGTCTTGCCACAAGGCGTTTCTAACATTGCTATAGAAATTAAGGACAGTGTCTTCTGTTGGGACCCTTCATCTTCCAGGCCTACTCTTTCAGATCTCAATATGAAAGTTGAAAAAGGGATGCGTGTAGCTGTTTGTGGTACGGTTGGTTCAGGGAAATCAAGTTTTCTTTCTTGCATCCTTGGAGAGATTCCTAAGCTTTCTGGTGGAGTGAGTGTGTGCGGTTCTGCCGCCTATGTCTCTCAATCCGCATGGATACAATCAGGAACTATAGAAGAAAATATCCTCTTTGGAAGCCCAATGGACAAACCAAAGTACAAGAatgttattcatgcttgttcactgaaaaaggatctaGAACTTTTTTCACATGGAGATCAGACAATTATTGGTGATAGAGGTATAAACCTGAGTGGTGGTCAGAAGCAGCGGGTACAGCTTGCCCGGGCACTCTACCAAGATGCTGATATTTATCTCCTTGATGATCCCTTCAGTGCAGTTGACGCACACACTGGATCAGAGTTGTTTAGGGAGTATATATTGACGGCACTAGCAAACAAAACAGTCATTTTTGTGACCCATCAAGTTGAATTTCTTCCTGCTGCTGATTTGATACTGGTTCTCAAGGAAGGTTGCATCATACAGGCAGGAAAATATGATGATCTTTTACAAGCAGGGACCGATTTTGAAGCTCTAGTTTCAGCTCACCATGAAGCCATAGAAGCTATGGATATCCCTACACACTCCTCTGAAGATTCAGACGAAAATTTATCATTGGAGGAAGCTGTGATGACCAGTAAGAAATCCATTTGTTCTGCGAACGATATCGACAGTTTGACAAAGGAAATGCAAGATGGGCCATCAGCTACCGATCAAAAAGCAATTAAGGACAAGAAGAAAGCAAAAAGGTCGAGGAAAAAACAGCTTGTTCAGGAAGAGGAGAGGGTTAGAGGTAGAGTAAGCATGAAGGTGTATCTTTCTTACATGGCAGCGGCATATAAAGGTTTATTGATTCCACTCATCATCATTGCACAAGCATTGTTTCAGTTCCTTCAGATTGCTAGTAATTGGTGGATGGCATGGGCTAACCCTCAAACAGAAGGAGACGAGCCCAAAGTAACTCCAATGGTTCTTCTTCTTGTTTACATGGCCCTTGCTTTTGGAAGTTCATGGTTTATATTTGTAAGGGCCGTTCTAGTGGCTACATTTGGTCTTGCAGCTGCACAGAAGCTATTTTTGAAGATGCTTAGATGTGTTTTCCATGCACCAATGTATTTCTTTGACTCTACACCGGCCGGAAGAATCTTGAACCGGGTTTCAGTTGATCAAAGTGTTGTGGATCTTGATATCCCTTTTAGACTTGGCGGGTTTGCTGCAACAACAATACAACTTATTGGTATTGTTGGAGTAATGACAGAAGTTACATGGCAAATTTTGCTCTTGGTCATCCCAATGGCCATGGCTTGTTTGTGGATGCAGAAATACTACATGTCTTCATCGAGGGAACTGGTCCGTATTGTAAGCATCCAGAAATCACCGATTATAAATCTTTTTGGTGAATCAATTGCTGGAGCATCCACCATCAGGGGTTTTGGACAAGAAAAAAGGTTCATGAAGCGGAACCTTTATCTTCTGGATTGTTTTGCACGACCGTTCTTCTGCAGTCTTGCTGCTATTGAGTGGCTCTGTCTGCGCATGGAGTTACTGTCCACCTTCGTATTTGCTTTCTGCATGGTTTTGCTTGTTAGCTTTCCCCAAGGAAGTATTGACCCCAGCATGGCCGGACTTGCTGTTACATATGGTCTGAATTTAAATGCTCGCTTATCACGGTGGATACTTAGCTTTTGCAAACTTGAAAATAAAATTATATCTATCGAAAGAATTTATCAGTACAGCCAAATTCCTAGTGAAGCACCAGCAATTATTGAAGATTCTCGCCCTCCATCCTCATGGCCTGAACATGGGACAATCGAAATAACTGATTTGAAGGTCCGTTACAAAGAAAATCTTCCTTTGGTGCTTCATGGAATATCATGCACATTTCCTGGTGGGAAGAATATAGGAATAGTTGGACGCACTGGCAGTGGCAAATCTACTTTGATTCAAGCATTATTTCGATTGATAGAACCAGCAGATGGAAGTATCCACATAGACAACATCAATATTTTAGAGATTGGTCTTCATGACCTCCGAAGCCGTCTAAGTATCATACCGCAGGATCCAACCTTATTTGAAGGGACCATTCGAGGAAATCTTGATCCTCTTGAGGAGCACACAGATAAAGACATTTGGGAGGCACTAGATAAATCTCAACTTGGAGAGATCATCCGCGAGAAAGGACAAAAGCTTGATACACCCGTTATAGAAAATGGAGACAATTGGAGTGTAGGACAGCGGCAACTTGTTTCTCTTGGCCGAGCTCTACTGAAGCAGTCGAAAATACTTGTACTTGATGAAGCAACAGCATCCGTCGATACTGCTACTGATAATCTCATCCAAAAGATTATTCGAACAGAGTTCAAAGACTGCACTGTGCTCACCATTGCGCATCGTATTCCAACTGTCATTGACAGCGATCAAGTTCTGGTGCTCAGTGATGGTCAAGTTGCGGAGTTTGACACTCCTTTACGACTATTAGAGGACAAGTCATCGATGTTTCTAAAGTTGGTGACTGAGTATTCGTCGCGGTCAAGTGGTATACCAGAATTTTAG 4599 0.4134 MALNEILAQKLFSSGSWDTLFSEILGLPLLELVAICTNLAILVLFLLREVFLCVGGRFWFYKDNTVVGNAGSIRISVDGGENFEVRRGTWFNLSVLSCFYVLLVQVLVLGFDGVGLVKEEFVVVDLSLLFVPFVQGLVWIVLCFIALHCKFKVSHKFPILLRVSWLVLFVVCLFGLYVDGRGLWMEGSKHWHSHVFANFAATPALAFLCIVAIRGVTGIQVCRNSENQQPLLVSEEEDEEPGCLKVTPYKDAGVFSLATLSWLNSLLSIGAKRPLELKDIPLVAPKDRAKTNFKVLNSNWEKMKAENSSTQPSLAWTLLKSFWKEAAINAIFAGITTLVSYVGPYMISYFVDYLSGIETFPHEGYVLAGIFFVAKLVETFTTRQWYLGVDILGMHVRSALTAMVYQKGLRLSSLAKQSHTSGEIVNYMAIDVQRVGDYAWYLHDMWMLPLQIVLALAILYKNVGIASIATLVATIISIVVTIPVAQIQEEYQDKLMAAKDERMRKTSECLRNMRILKLQAWEDRYRIKLEEMRGVEYKWLRKALYSQAFITFMFWSSPIFVSAVTFATSILLGSKLTAGSVLSALATFRILQEPLRNFPDLVSTMAQTKVSLDRLSCFLLEEELQEDATIVLPQGVSNIAIEIKDSVFCWDPSSSRPTLSDLNMKVEKGMRVAVCGTVGSGKSSFLSCILGEIPKLSGGVSVCGSAAYVSQSAWIQSGTIEENILFGSPMDKPKYKNVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQLARALYQDADIYLLDDPFSAVDAHTGSELFREYILTALANKTVIFVTHQVEFLPAADLILVLKEGCIIQAGKYDDLLQAGTDFEALVSAHHEAIEAMDIPTHSSEDSDENLSLEEAVMTSKKSICSANDIDSLTKEMQDGPSATDQKAIKDKKKAKRSRKKQLVQEEERVRGRVSMKVYLSYMAAAYKGLLIPLIIIAQALFQFLQIASNWWMAWANPQTEGDEPKVTPMVLLLVYMALAFGSSWFIFVRAVLVATFGLAAAQKLFLKMLRCVFHAPMYFFDSTPAGRILNRVSVDQSVVDLDIPFRLGGFAATTIQLIGIVGVMTEVTWQILLLVIPMAMACLWMQKYYMSSSRELVRIVSIQKSPIINLFGESIAGASTIRGFGQEKRFMKRNLYLLDCFARPFFCSLAAIEWLCLRMELLSTFVFAFCMVLLVSFPQGSIDPSMAGLAVTYGLNLNARLSRWILSFCKLENKIISIERIYQYSQIPSEAPAIIEDSRPPSSWPEHGTIEITDLKVRYKENLPLVLHGISCTFPGGKNIGIVGRTGSGKSTLIQALFRLIEPADGSIHIDNINILEIGLHDLRSRLSIIPQDPTLFEGTIRGNLDPLEEHTDKDIWEALDKSQLGEIIREKGQKLDTPVIENGDNWSVGQRQLVSLGRALLKQSKILVLDEATASVDTATDNLIQKIIRTEFKDCTVLTIAHRIPTVIDSDQVLVLSDGQVAEFDTPLRLLEDKSSMFLKLVTEYSSRSSGIPEF 1532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02368 1532 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1277 1515 IPR027417 -
Car03g02368 1532 Gene3D - 639 871 IPR027417 -
Car03g02368 1532 SUPERFAMILY ABC transporter transmembrane region 315 621 IPR036640 GO:0005524|GO:0016021
Car03g02368 1532 MobiDBLite consensus disorder prediction 910 937 - -
Car03g02368 1532 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 641 864 IPR003439 GO:0005524
Car03g02368 1532 Coils Coil 488 508 - -
Car03g02368 1532 CDD ABC_6TM_ABCC_D1 328 615 IPR044746 GO:0140359
Car03g02368 1532 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 969 1239 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Car03g02368 1532 SUPERFAMILY ABC transporter transmembrane region 966 1266 IPR036640 GO:0005524|GO:0016021
Car03g02368 1532 CDD ABCC_MRP_domain1 641 840 - -
Car03g02368 1532 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 637 863 IPR027417 -
Car03g02368 1532 CDD ABC_6TM_ABCC_D2 967 1261 IPR044726 GO:0140359
Car03g02368 1532 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 84 1532 - -
Car03g02368 1532 ProSitePatterns ABC transporters family signature. 766 780 IPR017871 GO:0005524
Car03g02368 1532 SMART AAA_5 668 849 IPR003593 -
Car03g02368 1532 SMART AAA_5 1312 1497 IPR003593 -
Car03g02368 1532 Pfam ABC transporter 659 793 IPR003439 GO:0005524
Car03g02368 1532 Pfam ABC transporter 1303 1451 IPR003439 GO:0005524
Car03g02368 1532 Pfam ABC transporter transmembrane region 329 595 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Car03g02368 1532 Pfam ABC transporter transmembrane region 969 1211 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Car03g02368 1532 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1286 1520 IPR003439 GO:0005524
Car03g02368 1532 Gene3D ABC transporter type 1, transmembrane domain 928 1267 IPR036640 GO:0005524|GO:0016021
Car03g02368 1532 Gene3D ABC transporter type 1, transmembrane domain 294 624 IPR036640 GO:0005524|GO:0016021
Car03g02368 1532 PANTHER MULTIDRUG RESISTANCE PROTEIN ABC TRANSPORTER FAMILY PROTEIN 84 1532 - -
Car03g02368 1532 Gene3D - 1269 1522 IPR027417 -
Car03g02368 1532 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 327 607 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Car03g02368 1532 CDD ABCC_MRP_domain2 1284 1504 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02368 Car-Chr3 69583926 69592137 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02368 641 857 Calmodulin-binding Proteins AT2G36910 31.780 7.01e-21 98.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02368 - - gmx:100790550 2582.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02368 03 69583926 69592137 Car03g02368 03 69583926 69592137 ECH
Car03g02368 03 69583926 69592137 Car04g00069 04 741421 749534 PCT