Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02366 atgagaatgaagaagaacaagtttttcatcttcTTCTGCTACATTGTCATAGATTGTTTCTCTTACACTTTTTCTACTACAACCACAAATGATGAAGTTTCATCTTTGCTTTCAATAAAATCAGGTCTCGTTGATCCTTTCAACACTCTTCATGATTGGAACAAAAATGATGCATCTCATTGTAACTGGACAGGAATCAAATGCAACTCATTTGGAACTGTTGAAAGCCTTGATCTCTCTCACAAGAATCTCAGTGGTATAGTTTCCAATGATATTCAAAGACTTAAAACTCTTACTACTCTTAATTTATGTTGCAATTCATTTTCATCACCATTACCAAAATCCATATCCAATCTCACCACATTGAATAATCTTGATGTAAGTCAGAATTTCTTCATTGGTGAATTTCCATTAGGCCTTGGAAGAGCATTAAGACTTACAACAATAAATGCATCAAGCAATGAGTTCACAGGTTCACTTCCTGAGGATCTTGGAAATGCAACTTCTTTAGAGATGATTGATCTTAGAGGAAGTTTCTTTGAAGGTTCAATTCCAAAATCATTTAGCAACTTGCATAAGTTGAAGTTCCTTGGTTTATCAGGGAACAATCTCACTGGAAAAATTCCTGGTGAGCTTGGAAAAATTTCATCATTGGAGTATATGATTCTTGGATATAATGCTTTTGAAGGTGAGATTCCAAAAGAGTTTGGAAATCTCACTAGTTTGAAGTATCTTGATTTGGCAGTAGCTAATCTTGGTGGTGAGATTCCAAATGAATTTGGAAATCTCAAGTTGTTGGAAACACTTTTCTTATACAACAACAATTTTGATGGAAGGATTCCACATGAAATTGGTAACATGAGTTCTTTAAAGTTTTTGGATCTTTCTGATAACATTTTGTCAGGAAAAATTCCAGATGAAATAAGTCTTTTGAAGAATTTGAAGCTTGTGAACTTCATGGGAAACAAGTTATCTGGTTTTGTTCCTTCTGGTCTTGGAAATTTGCCTCAACTTGAAGTTCTTGAGCTATGGAATAATTCTTTGTCAGGTCCATTGCCTAGTAACCTTGGCGAGAATTCGCCATTGCAATGGTTGGATGTATCATCCAATTCATTTTCTGGAGAGATTCCAAAAACTCTTTGCAGCCAAGGGAATCTCACCAAGCTTATACTTTTCAACAATGCTTTTTCAGGTCCAATTCCATCGAGTCTATCGATGTGTTATTCGCTTGTTCGTGTTCGAATTCAGAACAATTTTCTTATAGGGACAGTCCCTGTTGGTCTTGGAAAGCTTGAGAAACTTCAAAGGTTAGAATTAGCTAACAATAGTCTCACTGGTGGAATTCCAGATGATATTCCTTCTTCCACTTCTCTTTCTTTCATTGATCTCTCAAGAAATAAACTTCATTCTTCTCTTCCTTCCACTATTCTTTCCATTCCAAATCTTCAAGTTTTCATGGTTTCCAACAACAACTTACAAGGTAAAATACCAGACCAATTTCAGGACTCCCCTTCGCTAACCATTCTTGATCTCTCATCGAATCATTTGTCCGGAAACATTCCAGAAAGCATAGGTTCATGTCAGAAACTGGTGAATTTGAACCTTCAAAATAACCTTTTGATAGGTGAAATCCCAAATGCATTAGCTAACATGCCAACATTAGCCATGCTTGATCTTTCAAACAATTCTTTGACTGGTCATATACCAGAAAACTTTGGTTTATCACCAGCTCTTGAATCATTTAATGTCTCATACAACAAGCTTGAAGGTTCTGTGCCAGAAAATGGTATGCTAAGAACTATAAATCCAAATAATCTTGTTGGCAATGCTGGCCTATGTGGTGGTGTCTTCCTTCCATGTGATCAAAACTCAGCATACTCATCAAGGCATGGAAGTATACATGCAAAACACATTATTACAGGATGGATCATTGGAATTTCATTAATTCTAGTCATTGGAATTACAATTTTGGTTGCAAAATCTGTATATGTAAGGTGGTACACTGGTGGTTTTTGCTTCAAAGAGAGATTTTATAAAGGTCACAAAGGGTGGCCATGGAGATTGATGGCATTTCAAAGGCTTGGATTTACAAGTACTGACATTCTAGCTTGTATCAAAGAAACAAATGTGATTGGAATGGGAGCTACCGGCGTTGTTTATAAAGCCGAGATATCGCAATCTAATACAGCGGTCGCAGTGAAAAAGTTGTGGAGATCAGGAACTGATATTGAAGTAGGAGGAGGAGGAGGAAGTGATGAACTTGTTGGAGAGGTAAATGTTTTAGGAAGACTAAGGCATAGGAACATTGTTAGACTATTAGGATTTCTTTATAATGACACTGATTTGATGATAGTTTATGAGTTTATGCCCAATGGAAATTTGGGAGATGCCTTGCATGGTAAGCAAGCTGTTAGACAGCttgtggattgggtttcaagatataacatagctctaggagttgctcatggacttgcttatcttcaccatgactgtcatccgccagttatccatcgtgacatcaagtctaataatatacttcttgatgcaaatcttgaggcaaggatagcggatttcgggttagccaagatGATGATAAGGAAGAATGAAACAGTCTCCATGGTTGCTGGATCCTATGGCTACATTGCTCCTGAATATGGATATGCTTTAAAGGTGGATGAAAAGATTGATGTTTACAGTTATGGAGTAGTATTACTGGAGCTTCTAACAGGAAAGAGGCCATTAGATCCAGAATTTGGAGAGTGTGTAGACATTGTAGAGTGGATTAGAAGGAAGATTAGAGACAACAAATCTCTAGAAGAAGCATTAGATCCAAGTGTAGGAAACTCCAAGCATGTTGTAGAAGAGATGCTTTTAGTCTTAAGAATAGCAGTTGTTTGCACTGCTAAGCTTCCTAAGGACAGACCAAACATGAGGGATGTCATAATGATGCTTGGAGAGGCAAAGCCTAGAAGAAAAAGCAGTGGCAACAATGAAACATCAGCAGCAGCTAACAGCAACAATAAGGAGATGTCAGTTTTTAGCACATCACCAGTTAGTGGTCTTCTATAG 3069 0.3467 MRMKKNKFFIFFCYIVIDCFSYTFSTTTTNDEVSSLLSIKSGLVDPFNTLHDWNKNDASHCNWTGIKCNSFGTVESLDLSHKNLSGIVSNDIQRLKTLTTLNLCCNSFSSPLPKSISNLTTLNNLDVSQNFFIGEFPLGLGRALRLTTINASSNEFTGSLPEDLGNATSLEMIDLRGSFFEGSIPKSFSNLHKLKFLGLSGNNLTGKIPGELGKISSLEYMILGYNAFEGEIPKEFGNLTSLKYLDLAVANLGGEIPNEFGNLKLLETLFLYNNNFDGRIPHEIGNMSSLKFLDLSDNILSGKIPDEISLLKNLKLVNFMGNKLSGFVPSGLGNLPQLEVLELWNNSLSGPLPSNLGENSPLQWLDVSSNSFSGEIPKTLCSQGNLTKLILFNNAFSGPIPSSLSMCYSLVRVRIQNNFLIGTVPVGLGKLEKLQRLELANNSLTGGIPDDIPSSTSLSFIDLSRNKLHSSLPSTILSIPNLQVFMVSNNNLQGKIPDQFQDSPSLTILDLSSNHLSGNIPESIGSCQKLVNLNLQNNLLIGEIPNALANMPTLAMLDLSNNSLTGHIPENFGLSPALESFNVSYNKLEGSVPENGMLRTINPNNLVGNAGLCGGVFLPCDQNSAYSSRHGSIHAKHIITGWIIGISLILVIGITILVAKSVYVRWYTGGFCFKERFYKGHKGWPWRLMAFQRLGFTSTDILACIKETNVIGMGATGVVYKAEISQSNTAVAVKKLWRSGTDIEVGGGGGSDELVGEVNVLGRLRHRNIVRLLGFLYNDTDLMIVYEFMPNGNLGDALHGKQAVRQLVDWVSRYNIALGVAHGLAYLHHDCHPPVIHRDIKSNNILLDANLEARIADFGLAKMMIRKNETVSMVAGSYGYIAPEYGYALKVDEKIDVYSYGVVLLELLTGKRPLDPEFGECVDIVEWIRRKIRDNKSLEEALDPSVGNSKHVVEEMLLVLRIAVVCTAKLPKDRPNMRDVIMMLGEAKPRRKSSGNNETSAAANSNNKEMSVFSTSPVSGLL 1022
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02366 1022 Pfam Leucine Rich Repeat 289 309 IPR001611 GO:0005515
Car03g02366 1022 Gene3D Ribonuclease Inhibitor 144 251 IPR032675 -
Car03g02366 1022 Gene3D Phosphorylase Kinase; domain 1 705 792 - -
Car03g02366 1022 SUPERFAMILY RNI-like 223 574 - -
Car03g02366 1022 PANTHER UNNAMED PRODUCT 7 997 - -
Car03g02366 1022 MobiDBLite consensus disorder prediction 994 1022 - -
Car03g02366 1022 SUPERFAMILY Protein kinase-like (PK-like) 702 984 IPR011009 -
Car03g02366 1022 Gene3D Ribonuclease Inhibitor 252 312 IPR032675 -
Car03g02366 1022 Gene3D Ribonuclease Inhibitor 31 143 IPR032675 -
Car03g02366 1022 Gene3D Ribonuclease Inhibitor 313 378 IPR032675 -
Car03g02366 1022 ProSiteProfiles Protein kinase domain profile. 705 991 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g02366 1022 MobiDBLite consensus disorder prediction 986 1022 - -
Car03g02366 1022 Pfam Leucine rich repeat N-terminal domain 30 69 IPR013210 -
Car03g02366 1022 SMART LRR_typ_2 191 215 IPR003591 -
Car03g02366 1022 SMART LRR_typ_2 504 527 IPR003591 -
Car03g02366 1022 SMART LRR_typ_2 551 574 IPR003591 -
Car03g02366 1022 SMART LRR_typ_2 479 502 IPR003591 -
Car03g02366 1022 SMART LRR_typ_2 431 455 IPR003591 -
Car03g02366 1022 SMART LRR_typ_2 335 359 IPR003591 -
Car03g02366 1022 SMART LRR_typ_2 263 287 IPR003591 -
Car03g02366 1022 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 7 997 - -
Car03g02366 1022 Pfam Leucine rich repeat 529 588 IPR001611 GO:0005515
Car03g02366 1022 Pfam Leucine rich repeat 457 516 IPR001611 GO:0005515
Car03g02366 1022 SMART serkin_6 705 984 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g02366 1022 Gene3D Transferase(Phosphotransferase) domain 1 793 1012 - -
Car03g02366 1022 Gene3D Ribonuclease Inhibitor 379 624 IPR032675 -
Car03g02366 1022 Pfam Protein kinase domain 707 979 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g02366 1022 ProSitePatterns Protein kinases ATP-binding region signature. 711 735 IPR017441 GO:0005524
Car03g02366 1022 ProSitePatterns Serine/Threonine protein kinases active-site signature. 835 847 IPR008271 GO:0004672|GO:0006468
Car03g02366 1022 PRINTS Leucine-rich repeat signature 506 519 - -
Car03g02366 1022 PRINTS Leucine-rich repeat signature 551 564 - -
Car03g02366 1022 ProSiteProfiles Leucine-rich repeat profile. 289 311 IPR001611 GO:0005515
Car03g02366 1022 SUPERFAMILY L domain-like 28 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02366 Car-Chr3 69562914 69566759 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02366 3 1022 Receptor kinase-like Gene Family AT1G08590 58.037 0.0 1162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Car03g02366 Pkinase 5.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02366 - - gmx:100789665 1656.73