Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02353 ATGGATGCTCGTCCTGCTTTCTCAATTGAAAGATCAAGTACGAAACAGATGAATAACATAGGGATGTCTGGAGCATTTCCTTCATCGTTGTCTGTCCTTCCAACACATCTAGAAGAGACATACCCCCGATTATCTGATTCACAATCGTCTTTTGTGGAAAATGATCTTAAGACAATAACTTTTAATCATCCAAGTCATATAAGTTCAAGTGGAGCAGTTGGGCATATGTTTTCATCTTCCCCTGGATATTCAACCGACCTTCATCACTCATCTCTTTCACCTCATGAAAAAAACTCCAGAAATGCTCATTTTATTTCACAATCATTGAGTAATGTGGCTTCGATGCCATTATCATATTCTTCAAATAATGGGCCGGTACCTTCTACAACATCAATACATTATTCCAACGGAAACAGTACTTCTTGGCACGCAGATTCCCTTCCTAGCTTTCTTGATTTTGCTACGAATACCTCAATTGATAATAATCAAGTCGATAGCAGTGCCGGAAATATTATGGCTACTGAGGAGTTTTCTAAGCGAAATGATTGGCAGGAGTGGGCTGACCAGCTAATTAGTGATGATGATACTTTGACTTCTAATTGGAACGATCTTCTTGCTGATAATATTCACGATCTTGAGCCAAAGGCGGTGGATCTGGTTTCAAAATCATCTTCACAATTTCCAGCAGGACACCAATCCCAAGGTCACCAACAGCTTATGGCTCTATCTGGAGAAAATCATGTTGGTGCTGCTCCATCTTCCTCAGCAAATTCTGCACCTGCCAAGCCACGGATGCGGTGGACTCCTGAGCTTCATGAGGCATTTGTGGAGGCTGTCAACCAACTTGGTGGGAGTGAAAGAGCTACCCCTAAGGGTGTGCTGAAGCTCATGAAAGTCGAAGGATTAACTATATATCATGTTAAAAGCCACTTACAGAAATACAGGACAGCTAGGTATAGACCAGAACCATCTGAAGGAGCTGCAGAGAAAAATCTAAGCCCCATTGACGATATTTCATCTCTAGATTTGAAAACTGGTATTGAGATCACGGAAGCTCTGCGACTGCAGATGGAGGTCCAGAAACGGTTACATGAACAGCTTGAGATTCAAAGAAATCTACAGTTGCGAATAGAAGAACAAGGCAGGTACCTCCAGAAGATGTTTGAGAAGCAATGCAAATCAGGTGTTGAACCATTTAAGGCATCGCCATCGGCCATTGAGAATCCATCTGGAATGTCTTCCGACATCGTGAAAGATTCTCCTACCAAAAACGAATTAGAAGCATCCAAAACGGACCATTCCGGGTCAGGATCTGATCAAGCTAATGGTGGTACCACTGTTGAGGAAAGCTCGCTGAAAGCGGGTGGGAAGCAGGATACCTCCAAAAGCCAAGCTTTTGAGGATCTTAAGCAAAATGATAATGAAGATAGCACTCAAGCCCCTAAGCGTCCAAGGACCGATGAGTAA 1467 0.4274 MDARPAFSIERSSTKQMNNIGMSGAFPSSLSVLPTHLEETYPRLSDSQSSFVENDLKTITFNHPSHISSSGAVGHMFSSSPGYSTDLHHSSLSPHEKNSRNAHFISQSLSNVASMPLSYSSNNGPVPSTTSIHYSNGNSTSWHADSLPSFLDFATNTSIDNNQVDSSAGNIMATEEFSKRNDWQEWADQLISDDDTLTSNWNDLLADNIHDLEPKAVDLVSKSSSQFPAGHQSQGHQQLMALSGENHVGAAPSSSANSAPAKPRMRWTPELHEAFVEAVNQLGGSERATPKGVLKLMKVEGLTIYHVKSHLQKYRTARYRPEPSEGAAEKNLSPIDDISSLDLKTGIEITEALRLQMEVQKRLHEQLEIQRNLQLRIEEQGRYLQKMFEKQCKSGVEPFKASPSAIENPSGMSSDIVKDSPTKNELEASKTDHSGSGSDQANGGTTVEESSLKAGGKQDTSKSQAFEDLKQNDNEDSTQAPKRPRTDE 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02353 488 MobiDBLite consensus disorder prediction 433 462 - -
Car03g02353 488 SUPERFAMILY Homeodomain-like 260 316 IPR009057 -
Car03g02353 488 MobiDBLite consensus disorder prediction 463 488 - -
Car03g02353 488 Gene3D - 261 320 - -
Car03g02353 488 Pfam Myb-like DNA-binding domain 264 315 IPR001005 -
Car03g02353 488 MobiDBLite consensus disorder prediction 399 488 - -
Car03g02353 488 Pfam MYB-CC type transfactor, LHEQLE motif 347 394 IPR025756 -
Car03g02353 488 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 262 316 IPR006447 GO:0003677
Car03g02353 488 Coils Coil 350 370 - -
Car03g02353 488 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 259 319 IPR017930 -
Car03g02353 488 PANTHER PROTEIN PHR1-LIKE 1-LIKE ISOFORM X1 59 488 - -
Car03g02353 488 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 59 488 IPR044848 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02353 Car-Chr3 69455022 69463385 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02353 1 431 G2-like Transcription Factor Family AT4G28610 47.936 2.50e-106 321
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Car03g02353 Myb_DNA-binding 9.2e-09 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02353 03 69455022 69463385 Car03g02353 03 69455022 69463385 ECH