Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02346 ATGAGGAGTAGGTTTAAGCATAGGAGGAAGAGATTGCAGAAGATAATGAAGTGCCTTTGCTCAGGTGAGCTTGTTGTAAGAGAAGAAGATACAATGGTTCCTAATTCGTCGGAATCTCTTGCAACCAAGGATTATTATTCCTCAACAGTAAGTGGAATTTCTGGCCAAGATATTGGACAAGTTGAGAGAACGAGGCCGGATTCTGGTAACATACAAGAAGTTGAATCATCCTTGCGTGAGAGTGGCGTCTTGAACTATGAGGAAGCTAGAGCTTTGTTAGGGAGATATGAATATCAGGAAGGAAATATCGAAGCCGCTTTGCATGTTTTTGAAGGAATAGACATAGCTTCTGTGACTCCGAAGATAAAAAATTTCCTTGCCAAAAGTAGAGAACGCCCCAAGAGACGCTCCCGCAATTACACTACCCCACTAATGTCTATACATACATCCGGATTACTATTAGAAGCAATCTTGCTAAAAGCAAAATGTTTGCAGGTTCTTGGAAGGTTTAAAGAATCTGGCCAAACATGCAAAGTTATTCTGGACATGATCGAGTCTTCTTTACCTGAAGGCTTGCCTGGAAACTTTGGTGCCGAATGTAAATTGCAGGAGACTTTAAGTAAGGCAGTTGAGCTACTTCCAGAATTGTGGAAACTTGCTGATTGTCCACGTGAAGTTATTTTGTCTTACCGACATGCACTCCTTCATCGATGGAATCTTGATGCAGAGACCACTGCAAAAATTCAGAAAGAATTTGCCATTTTTCTTCTATATAGTGGAGAGGAAGAAATTCCCCCAGATCTTCGTTCCCATATGGACAGTTCATTTGTACCCAGAAACAACATAGAAGAGGCTATACTTCTTTTAATGATTTTGCAAAGAAAAATATCTCTAAATAAAATTGAGTGGGATCCTTCAATTTTGGAGCATCTTTCATTTGCTCTATCGGTTTCCGGGGATTTGACAGCTTTAGCCAACCAATGGGAAGAATTACTCCCTGGTACTATCAATCGAAGAGAAAGGTACCATGCTCTTGCTCTTTGTTATTATGGAGCAGATAAGGACTTAGTAGCACTTAATCTTCTTAGAAAATTGTTGAGTAGCAGAGAGGACCCAAAACATGTTCCTGCTTTGTTAATGGCTTCTAAGATATGTTGTGAGAACCCTGATTTTGCGAAAGATGGGGTTAGCTTTGCTAGCAGAGTTCTTGAGAGCTTAGATGAAAGATGTCAGCAGTTGGAAAGTCTCGCCAATTGCTTACTCGGTGTTTCACTTTCAACATACTCAAAATTGGCTGTTACTAATTCGGAGACGTTTGAGAGACAATCTGAGGCACTTCATTCCCTAGAAGCTGCAAGCACTATGACCAGAATGAGCGACCCTCTTGTGCTGTACTATTACAGTTTAGAATGTGCAGAGCAAAGGAAGTTGGATTCTGCACTTCATTATGCAAAACGTTTGCTAAACTTAGAAGCTGGGTCTAATATTAAAGGCTGGTTATTGTTAGCCCGGATATTATCAGCACAAAAACATTTTTTGGATGCTGAATCTATCATTGACGCTGCTTTGGATCGGACTGGAATATGGGATCAAGGAGATTTGCTGAGAACAAAAGCTAAACTGCAAATTGCACAGGGGAAGTTACCAGGTGCCATTAAAACATATACTCAGCTTCTTGCTATTCTTCTGGTCCAGAGAAAAACTTTTGGTTCAAGAAAGAAGCTTTATAAGGACGACAGAGATCATGCTAGGAACTTAGAAGTGGAAATATGGCATGATCTTGCTAATGTATATATAAGTCTCTCACAGTGGCAAGATGCAGAGGTGTGTCTTTCGAAATCTAAGGCCATCAAACTATACTCTGCTTCTAGATGTCATGTAATAGGTAAATATATGAGTTATCTTTTGAGTTATATGTCTTTTTTGGAATTAATGTCAACTGATTATAATCAGTTGAAAAGAACTGCCAGATATTTTTGA 1980 0.3949 MRSRFKHRRKRLQKIMKCLCSGELVVREEDTMVPNSSESLATKDYYSSTVSGISGQDIGQVERTRPDSGNIQEVESSLRESGVLNYEEARALLGRYEYQEGNIEAALHVFEGIDIASVTPKIKNFLAKSRERPKRRSRNYTTPLMSIHTSGLLLEAILLKAKCLQVLGRFKESGQTCKVILDMIESSLPEGLPGNFGAECKLQETLSKAVELLPELWKLADCPREVILSYRHALLHRWNLDAETTAKIQKEFAIFLLYSGEEEIPPDLRSHMDSSFVPRNNIEEAILLLMILQRKISLNKIEWDPSILEHLSFALSVSGDLTALANQWEELLPGTINRRERYHALALCYYGADKDLVALNLLRKLLSSREDPKHVPALLMASKICCENPDFAKDGVSFASRVLESLDERCQQLESLANCLLGVSLSTYSKLAVTNSETFERQSEALHSLEAASTMTRMSDPLVLYYYSLECAEQRKLDSALHYAKRLLNLEAGSNIKGWLLLARILSAQKHFLDAESIIDAALDRTGIWDQGDLLRTKAKLQIAQGKLPGAIKTYTQLLAILLVQRKTFGSRKKLYKDDRDHARNLEVEIWHDLANVYISLSQWQDAEVCLSKSKAIKLYSASRCHVIGKYMSYLLSYMSFLELMSTDYNQLKRTARYF 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02346 659 SUPERFAMILY TPR-like 443 617 IPR011990 GO:0005515
Car03g02346 659 PANTHER TETRATRICOPEPTIDE-LIKE HELICAL DOMAIN-CONTAINING PROTEIN-RELATED 8 631 - -
Car03g02346 659 PANTHER PROTEIN NPG1 8 631 IPR043376 -
Car03g02346 659 Gene3D Tetratricopeptide repeat domain 64 624 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02346 Car-Chr3 69371949 69379270 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02346 9 629 Calmodulin-binding Proteins AT4G28600 56.151 0.0 641
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02346 K21843 - gmx:100784353 923.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02346 03 69371949 69379270 Car03g02346 03 69371949 69379270 ECH
Car04g00085 04 848315 853420 Car03g02346 03 69371949 69379270 PCT