Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02339 ATGGATCATATTATTGCCGGGAAGTTTAAGTTGGGAAGGAAAATTGGCAGTGGGTCTTTTGGGGAACTTTATATAGCTGTTAATGTACAAACTGGGGAGGAGGTGGCTGTCAAGCTGGAGCCTGTGAAGACCAAGCATCCACAACTTCACTATGAGTCAAAATTGTATATGCTTCTTCAAGGAGGAACTGGAGTGCCTCACCTCAAGTGGTTTGGAGTTGAGGGAGACTACAATGTGATGGCAATTGACCTTCTTGGACCTAGTCTGGAAGATCTGTTCAATTATTGCAACCGGAAGTTAACATTGAAGACGGTGTTAATGCTTGCTGATCAATTAATTAACAGAGTTGAATATATGCATTCAAGAGGTTTCCTTCACCGTGACATAAAACCTGACAATTTTTTAATGGGCCTAGGACGTAAAGCTAACCAGGTCTACATCATTGACTATGGCCTCGGCAAAAAATTCAGAGATCTTCAGACTCATCGGCACATACCATACAGGGAAAACAAGAACCTTACCGGTACAGCTCGATATGCGAGTGTCAACACTCATCTTGGAATTGAACAAAGCAGAAGGGATGATCTGGAATCTCTTGGCTATGTTCTCATGTACTTCTTAAGAGGAAGTCTTCCTTGGCAGGGACTGAAGGCTGGCACCAAAAAACAAAAATACGATAGAATCAGTGAGAAAAAGATGACAACTTCCATAGAGGTGCTCTGCAAATCATATCCATCAGAGTTTGTATCATACTTCCACTACTGCCGATCATTGCGGTTTGAAGACAAGCCTGACTATTCATATTTAAAGAGGCTTTTTCGAGATCTATTTATTCGAGAAGGCTATCAATTTGACTATGTTTTTGACTGGACTATATTGAAGTATCCGCAGATTGGTGGCAGCTCTAGAGGCCGACATGACAGCGGCAAGGCAGCTATGAATCCAGGGCCATCTGTACAGAGGCCAGAAAAGATCTCAGTTGGAAAAGAGCTTCGAGAGAGATTCACTGGTGCTGTTGAAGCATTCTCGCGGAGGAACCCAACAACTTCTAGTCCTCGCGTTGAACACGCCAAGCATAGGAGTTTTGAGGATGTCACTGCAATGCACAAGGATGGGTATCACGATCAAGAGAAGGGACGCAATTTGACTCGATATGGAAGCAGTTCAAGAAGACCAATAATCTCATCATCGACCAGGCCAACTTCCTCAGGTGATCATACCGACACTCGTACGGGCCGGCTGACCTCAATTGCTAGCCGTCCATCTACTGCACATAGAATTCAACCAATGTATGAAACCAAACAGCAACCTTACACACGCACAGGATCTACTAGAGGCAACCGCGATGATCCTCTGCGGAGTTTTGAACTCCTCTCTATCAGGAAGTAA 1389 0.4413 MDHIIAGKFKLGRKIGSGSFGELYIAVNVQTGEEVAVKLEPVKTKHPQLHYESKLYMLLQGGTGVPHLKWFGVEGDYNVMAIDLLGPSLEDLFNYCNRKLTLKTVLMLADQLINRVEYMHSRGFLHRDIKPDNFLMGLGRKANQVYIIDYGLGKKFRDLQTHRHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYDRISEKKMTTSIEVLCKSYPSEFVSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGYQFDYVFDWTILKYPQIGGSSRGRHDSGKAAMNPGPSVQRPEKISVGKELRERFTGAVEAFSRRNPTTSSPRVEHAKHRSFEDVTAMHKDGYHDQEKGRNLTRYGSSSRRPIISSSTRPTSSGDHTDTRTGRLTSIASRPSTAHRIQPMYETKQQPYTRTGSTRGNRDDPLRSFELLSIRK 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02339 462 MobiDBLite consensus disorder prediction 446 462 - -
Car03g02339 462 SUPERFAMILY Protein kinase-like (PK-like) 4 290 IPR011009 -
Car03g02339 462 PANTHER CASEIN KINASE-RELATED 1 451 - -
Car03g02339 462 Gene3D Transferase(Phosphotransferase) domain 1 1 331 - -
Car03g02339 462 MobiDBLite consensus disorder prediction 351 381 - -
Car03g02339 462 SMART serkin_6 9 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g02339 462 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Car03g02339 462 Pfam Protein kinase domain 10 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g02339 462 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Car03g02339 462 PANTHER CASEIN KINASE I-LIKE PROTEIN 1 451 - -
Car03g02339 462 MobiDBLite consensus disorder prediction 325 339 - -
Car03g02339 462 MobiDBLite consensus disorder prediction 382 445 - -
Car03g02339 462 MobiDBLite consensus disorder prediction 300 462 - -
Car03g02339 462 CDD STKc_CK1_delta_epsilon 8 282 - -
Car03g02339 462 ProSiteProfiles Protein kinase domain profile. 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02339 Car-Chr3 69316187 69322098 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02339 2 213 Miscellaneous Gene Families AT1G29230 26.941 1.48e-12 67.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Car03g02339 Pkinase 6e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02339 K08960 - cam:101493293 925.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02339 03 69316187 69322098 Car03g02339 03 69316187 69322098 ECH
Car03g02339 03 69316187 69322098 Car04g00094 04 928675 933782 PCT