Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02338 ATGGATTCAGCGAGGAGTTGGTTACAGAAGTTTCAGCCGCGAGATAGACTGAGAGCTTCTACGAGGAAGAAAGATGATTTTAATGCCGGAATTGAAGTTTCCAATGCACCTGTTGATGAAGATTCTCATTCCAGCGTCACCAAACAGAAGGTTGCGGCTGCAAAGCAATATATTGAGAACCATTACAAGGAACAAATGAAGAGCCTTCAAGAGAGAAAGGAACGCCGAACCGTCTTGGAAAAGAAATTGGCTGATGCCGATGTCTCTGAGGAAGACCAAAATAACCTACTTAAATTTTTAGAGAAGAAGGAAACTGAATATATGCGTCTTCAGAGGCATAAAATGGGTGTAGATGATTTTGAGATGTTGACTATGATCGGCAAAGGTGCATTTGGGGAGGTCAGAGTCTGTAAGGAAAAGACTACAGAGTCTGTATATGCAATGAAAAAGCTTAAGAAATCAGAGATGCTTCGAAGAGGCCAGGTAGAACATGTCAGAGCTGAGAGGAATCTCCTTGCAGAGGTTGACAGCAATTGCATAGTCAAACTTTACTGTTCTTTCCAGGATGATGAGTATCTATATCTTATTATGGAGTATCTACCGGGAGGTGATATGATGACTCTACTTATGAGAAAGGACACCTTGACCGAAGACGAAGCCCGATTTTATGTAGGAGAAACAATTCTAGCTATTCAATCTATACATAAACACAATTATATACATAGGGACATTAAGCCAGATAACTTATTGCTTGATAAATATGGACACTTGAAATTATCAGATTTTGGACTATGTAAACCGTTAGACTGTAGCACACTTGAAGAATCAGATTTTTCTATTGGTCAGAATGCAAATGGAACTACACAGAATGATGACCGGGCAGGTCCGAAACGTACACAACAAGAACAGTTGGAAAACTGGCAGAAGAACAGGAGGACACTTGCTTATTCTACAGTTGGTACACCAGATTATATTGCTCCAGAAGTTCTATTGAAGAAAGGTTATGGGATGGAATGTGATTGGTGGTCACTTGGAGCTATTATGTATGAAATGCTGGTGGGATATCCACCTTTTTATTCTGATGATCCAATGACAACATGTAGGAAGATAGTAAACTGGAAATCTCACCTGAAATTTCCTGAGGAAGCAAGGTTATCTCCGGAGGCCAAAGATCTTATAAGTAAGCTTTTGTGTAATGTCAACCAGAGACTGGGATCAAATGGTGCAGAGGAAATAAAGTCTCATCCATTCTTTGAAGGTGTTCAATGGGAAAGGTTGTATCAAATGGAAGCTGCATTTACTCCTGAAGTCAACGATGAGTTAGATACTCAAAATTTTGAAAAGTTTGAAGAGTCTGACAGCCAGACTCATTCATCATCAAGATCTGGTCCATGGAGAAAGATGCTTTCATCTAAGGACTTGAATTTTGTGGGATACACATACAAGAACTTTGAAATTGTTAACGACTATCAAGTTCCTGGGATGGCTGAATTGAAGAAAACCTCTAAACCAAGGAGGCCATCTATCAAGTCGCTGTTTGATGGCGAGTCGGAGACTTCTGAGGGTTCTGAGATTTCAGATGTGCCTGCAAGCAATCAATCTACTCACTGA 1611 0.4016 MDSARSWLQKFQPRDRLRASTRKKDDFNAGIEVSNAPVDEDSHSSVTKQKVAAAKQYIENHYKEQMKSLQERKERRTVLEKKLADADVSEEDQNNLLKFLEKKETEYMRLQRHKMGVDDFEMLTMIGKGAFGEVRVCKEKTTESVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVGETILAIQSIHKHNYIHRDIKPDNLLLDKYGHLKLSDFGLCKPLDCSTLEESDFSIGQNANGTTQNDDRAGPKRTQQEQLENWQKNRRTLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPMTTCRKIVNWKSHLKFPEEARLSPEAKDLISKLLCNVNQRLGSNGAEEIKSHPFFEGVQWERLYQMEAAFTPEVNDELDTQNFEKFEESDSQTHSSSRSGPWRKMLSSKDLNFVGYTYKNFEIVNDYQVPGMAELKKTSKPRRPSIKSLFDGESETSEGSEISDVPASNQSTH 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02338 536 MobiDBLite consensus disorder prediction 498 536 - -
Car03g02338 536 SUPERFAMILY Protein kinase-like (PK-like) 93 472 IPR011009 -
Car03g02338 536 MobiDBLite consensus disorder prediction 281 301 - -
Car03g02338 536 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 30 519 - -
Car03g02338 536 Pfam Protein kinase C terminal domain 437 481 IPR017892 GO:0004674|GO:0005524|GO:0006468
Car03g02338 536 Gene3D Phosphorylase Kinase; domain 1 437 447 - -
Car03g02338 536 ProSitePatterns Serine/Threonine protein kinases active-site signature. 239 251 IPR008271 GO:0004672|GO:0006468
Car03g02338 536 ProSiteProfiles AGC-kinase C-terminal domain profile. 419 491 IPR000961 GO:0004674|GO:0005524|GO:0006468
Car03g02338 536 Gene3D Transferase(Phosphotransferase) domain 1 313 436 - -
Car03g02338 536 ProSitePatterns Protein kinases ATP-binding region signature. 126 149 IPR017441 GO:0005524
Car03g02338 536 Gene3D Transferase(Phosphotransferase) domain 1 204 282 - -
Car03g02338 536 PANTHER SERINE/THREONINE-PROTEIN KINASE 30 519 - -
Car03g02338 536 SMART pkinase_C_6 419 483 IPR000961 GO:0004674|GO:0005524|GO:0006468
Car03g02338 536 Pfam Protein kinase domain 121 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g02338 536 ProSiteProfiles Protein kinase domain profile. 120 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g02338 536 MobiDBLite consensus disorder prediction 513 536 - -
Car03g02338 536 SMART serkin_6 120 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g02338 536 Gene3D Phosphorylase Kinase; domain 1 91 203 - -
Car03g02338 536 CDD STKc_NDR_like 118 482 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02338 Car-Chr3 69306828 69313573 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02338 1 513 AGC Kinase Gene Family AT2G20470 77.395 0.0 845
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Car03g02338 Pkinase 3.5e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02338 K08790 - gmx:100783286 956.436
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02338 03 69306828 69313573 Car03g02338 03 69306828 69313573 ECH
Car03g02338 03 69306828 69313573 Car04g02600 04 49617758 49624988 PCT
Car04g00096 04 946318 957820 Car03g02338 03 69306828 69313573 PCT