Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02317 ATGGAGGGAGAGAGGAAGAATAATGTAGAGGTGCATTACAGAGGAATTCGTAGGAGACCGTGGGGTAAATTTGCAGCAGAAATTCGTGATCCAACACGAAAAGGGTCACGAATATGGCTTGGAACATTTGACACAGCAGAAAAAGCTGGACGTGCATATGATGCTGCTGCTTTTCATTTTCGTGGTAACAGAGCCATTCTCAATTTCCCAAATGATTTTGCCCATTCTACTACTAAAATTGCCTCAAATTCATTACCTTCTTCTTCTTCTTCCATTTCACATCAACAACAACAAGATGATAATGATGATACTTTTGATGATTTGGCTTGCTTGGACAACAAGTTTTTGGAAGAACTCCTACAGGTGCAAGATGAGGCTGCAGGTAGTTCTAGAAGTACGAATAGCAAGAATTAG 414 0.4034 MEGERKNNVEVHYRGIRRRPWGKFAAEIRDPTRKGSRIWLGTFDTAEKAGRAYDAAAFHFRGNRAILNFPNDFAHSTTKIASNSLPSSSSSISHQQQQDDNDDTFDDLACLDNKFLEELLQVQDEAAGSSRSTNSKN 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02317 137 ProSiteProfiles AP2/ERF domain profile. 12 70 IPR001471 GO:0003700|GO:0006355
Car03g02317 137 PRINTS Ethylene responsive element binding protein signature 13 24 IPR001471 GO:0003700|GO:0006355
Car03g02317 137 PRINTS Ethylene responsive element binding protein signature 36 52 IPR001471 GO:0003700|GO:0006355
Car03g02317 137 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF105 7 88 - -
Car03g02317 137 SUPERFAMILY DNA-binding domain 12 71 IPR016177 GO:0003677
Car03g02317 137 SMART rav1_2 12 76 IPR001471 GO:0003700|GO:0006355
Car03g02317 137 CDD AP2 12 72 IPR001471 GO:0003700|GO:0006355
Car03g02317 137 Gene3D AP2/ERF domain 11 71 IPR036955 GO:0003700|GO:0006355
Car03g02317 137 PANTHER DNA-BINDING DOMAIN 7 88 IPR044808 GO:0003700|GO:0009873
Car03g02317 137 MobiDBLite consensus disorder prediction 79 98 - -
Car03g02317 137 Pfam AP2 domain 12 62 IPR001471 GO:0003700|GO:0006355
Car03g02317 137 MobiDBLite consensus disorder prediction 79 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02317 Car-Chr3 69116868 69117431 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02317 10 120 AP2-EREBP Transcription Factor Family AT3G23230 51.724 2.06e-32 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Car03g02317 AP2 1.8e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02317 - - cam:101488393 191.045
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02317 03 69116868 69117431 Car04g00115 04 1149496 1150172 PCT