Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02312 ATGGAAGAGGAAAAGGTGAAACAAGGTGAATTACCAAAGCAAATAAAGTACAGAGGAGTAAGGAGAAGGCCATGGGGGAAATGTGCCGCAGAGATTCGAGATTCAGCTCGACACGGAGCTCGAGTTTGGCTTGGTACATTCAACACTGCTGAGGAAGCTGCTAGAGCTTATGATCGTGCTGCTTTTGATATGAGAGGTTCTTCAGCTATTCTCAACTTTCCACATGAACATTTTCCATGCAATATGGCTTATAATCCTTCTAAGTCAAGTTCCTCTACTTCAATATCATCATCATCTTCAATAGTCAATAAATCTGAGCTTGGTAAACAACAAGTTTTGGAATTTGAGTATTTGGATGAGAAATTGTTAGAGGAACTCTTGGATTTTGAGAATACCATCGACCCGAATTGGTTCAAGTAG 420 0.4024 MEEEKVKQGELPKQIKYRGVRRRPWGKCAAEIRDSARHGARVWLGTFNTAEEAARAYDRAAFDMRGSSAILNFPHEHFPCNMAYNPSKSSSSTSISSSSSIVNKSELGKQQVLEFEYLDEKLLEELLDFENTIDPNWFK 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02312 139 Pfam AP2 domain 16 66 IPR001471 GO:0003700|GO:0006355
Car03g02312 139 SMART rav1_2 16 80 IPR001471 GO:0003700|GO:0006355
Car03g02312 139 PANTHER DNA-BINDING DOMAIN 10 131 IPR044808 GO:0003700|GO:0009873
Car03g02312 139 SUPERFAMILY DNA-binding domain 16 76 IPR016177 GO:0003677
Car03g02312 139 PRINTS Ethylene responsive element binding protein signature 40 56 IPR001471 GO:0003700|GO:0006355
Car03g02312 139 PRINTS Ethylene responsive element binding protein signature 17 28 IPR001471 GO:0003700|GO:0006355
Car03g02312 139 PANTHER OS09G0571700 PROTEIN 10 131 - -
Car03g02312 139 Gene3D AP2/ERF domain 15 75 IPR036955 GO:0003700|GO:0006355
Car03g02312 139 ProSiteProfiles AP2/ERF domain profile. 16 74 IPR001471 GO:0003700|GO:0006355
Car03g02312 139 CDD AP2 16 75 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02312 Car-Chr3 69101175 69101752 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02312 13 130 AP2-EREBP Transcription Factor Family AT3G23230 64.167 1.39e-44 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Car03g02312 AP2 4e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02312 - - mtr:MTR_7g096700 176.792
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02312 03 69101175 69101752 Car03g02312 03 69101175 69101752 ECH
Car03g02312 03 69101175 69101752 Car04g02441 04 43209454 43210065 PCT