Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02309 ATGTCTTATCATGCATATTCATTAGGTGAAGGTATTGTTGGACAGGTAGCTGTTTCTGGAAAACATCGGTGGATTTGTGGAGATAATCAAGTTACAAGTTCTGGCTTGTCTATTGATTTTGCTGATGGGTGGCAATCTCAGTTTTCTGCTGGAATTAGGACAATTGTTGTCGTGCCTGTAGTCCCACTAGGCGTTGTTCATCTCGGATCTCTAATAAAAGTGAATGAAGATATAGAGGTTGTTAATCATATAAGAAATATTTTCTTGACTACTCAAAATTACTCAATAGACCATATTCCTAGCCAAATACAAAGTAGTTTGAAGATCCCTTTGTCTCAATCGGATGTCTTGGAGGAAAAATTGTCTTCAGATATTACGCCTGCGTGCTTACAAAATACAGCAAGAACCATGAGGAATAAAACTGTGGATGTTTTGATGCCCCTTCAATGTTCTGCAAGGAACAACAACACAACTCATTCTGCTTATTGGGAAATCGGAGATAATATAGTCAAGCATGAAGGACCCAAACTCTGTAGTGACATGAGTTCCATTTTGCTTCAGTCAATGTCCTGTATGATTAATGTGGAGCATCAGAAGTTTGGAGCTATAAAACCTCTAAGTGGGAGGGAGTGTGAATCGGAACAAAATCTCGCTTCATTTTCGAACAATTTAGCTAAAAATAATGTCGGCGTTAATGATTTAATACACCAATCAGAAAAGGCCAAAGTTGATTCTGCATGCTTTCCTTCAGTTTTTCTTGATGCAGATGTTTGTGAAAGTGATCAGTTGCATTATGTGGATACCTACCAAAAAGCGATGTTGAATATTGCTAGACCTTTAGATGAGAACTCCCATAGACATACCAAAAATTTGGAGTTTCGAACTGAACCATGTGACACCGATGCCTCCTATACACTGTTGAAGTTTCCTGCTGGATATGAACTCCATGAAGCGCTTGGACCGGCTTCTTTAAAAGGGAGTAAATATTTCGATTGCCTGGCACAAGTTAACCAAGATATGGAAATTGTGGATATGCCGGACGAGATTAACACTACTCAATTGACTTCTGAATTCCCTCCAGAGCATCTTTTGGAAGCAATGGTGGCCAATATTTGCCACAGTAATAATGATGTTAATTATAGTAAATTATCATTTTGTAGATCAATGCAATCTGCAATGAGTTCTGGAAAAACGCCTGAAGCTTCTATTCACAATGTGCATACTATAAATGTAGAAGGCTATTCAAATTCAATGGATCATCCTTCTCTTGTCAGAGAGGAAAAATATCATTGTTTGAGTTCGTCATCAGGGATAAGTGGCATGATTTCATCTAAAGGTGTTACTTCTAAGTATCATAGTGCTTGTAGCGAACAACTTGAAAGGTCTTCTGAACCATCTAAGAACAGCAAGAAGAGGGCTAGGCCCGGGGAAAGTTGCAGACCTCGGCCAAGAGACAGGCAATTGATTCAGGATCGAATTAAAGAGCTGAGAGAGCTGGTGCCAAGTGGAGCAAAGTGCAGTATTGATTCGCTACTGGAGCGCACGATAAAGCACATGCTATTTTTGCAAGGCATAACTATGCATGCGGACAAGTTAACTAAATTTTCTGATACTAAATCAAAGTTGCATCATATGGAAACAGACATTGTTGGATCCTCTAGTTGCGAGCAGGGTTCAAGTTGGGCAGTGGAGGTAGGGGGTGATCTAAAAGTTCATTCAATATTAGTGGAGAATCTTAGCAAGAAAGGACACTTGCTTATTGAGATGCTATGTGAGGAGTGCAGCCATTTTCTCGAAATAGCAGAAGCAATAAAAAGCTTGGGCCTTAAAATTTTGAAGGGTGCAACAAAAGTGCGCGACGAGAAGATATGGATATGCTTTATTGTTGAGggtGAGAACAACCGAAATGTACACAGTTTGGACGTTTTGTGGCCGCTTGTTCAGATATTGCAATCCAAGCGCTGTGCATCAACAATAACTGATTGA 1986 0.3958 MSYHAYSLGEGIVGQVAVSGKHRWICGDNQVTSSGLSIDFADGWQSQFSAGIRTIVVVPVVPLGVVHLGSLIKVNEDIEVVNHIRNIFLTTQNYSIDHIPSQIQSSLKIPLSQSDVLEEKLSSDITPACLQNTARTMRNKTVDVLMPLQCSARNNNTTHSAYWEIGDNIVKHEGPKLCSDMSSILLQSMSCMINVEHQKFGAIKPLSGRECESEQNLASFSNNLAKNNVGVNDLIHQSEKAKVDSACFPSVFLDADVCESDQLHYVDTYQKAMLNIARPLDENSHRHTKNLEFRTEPCDTDASYTLLKFPAGYELHEALGPASLKGSKYFDCLAQVNQDMEIVDMPDEINTTQLTSEFPPEHLLEAMVANICHSNNDVNYSKLSFCRSMQSAMSSGKTPEASIHNVHTINVEGYSNSMDHPSLVREEKYHCLSSSSGISGMISSKGVTSKYHSACSEQLERSSEPSKNSKKRARPGESCRPRPRDRQLIQDRIKELRELVPSGAKCSIDSLLERTIKHMLFLQGITMHADKLTKFSDTKSKLHHMETDIVGSSSCEQGSSWAVEVGGDLKVHSILVENLSKKGHLLIEMLCEECSHFLEIAEAIKSLGLKILKGATKVRDEKIWICFIVEGENNRNVHSLDVLWPLVQILQSKRCASTITD 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02309 661 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 2 88 IPR025610 -
Car03g02309 661 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 654 IPR043561 GO:0003700|GO:0006355
Car03g02309 661 MobiDBLite consensus disorder prediction 456 487 - -
Car03g02309 661 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 473 522 IPR011598 GO:0046983
Car03g02309 661 MobiDBLite consensus disorder prediction 463 487 - -
Car03g02309 661 PANTHER BHLH TRANSCRIPTION FACTOR-LIKE PROTEIN 1 654 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02309 Car-Chr3 69079567 69086341 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02309 1 653 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 37.500 1.66e-121 377
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02309 - - ccaj:109796613 875.159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02309 03 69079567 69086341 Car03g02309 03 69079567 69086341 ECH
Car03g02309 03 69079567 69086341 Car04g00123 04 1221216 1227306 PCT