Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02307 ATGACAGGTTGTTGTTCTCCTTGTGGAGCTTGCAAATTCTTGAGAAGAAAATGTGTTAGAGGTTGTGTTTTTGCACCATACTTTTGCCATGAAGAAGGTGCTACTCATTTTGCAGCTATTCATAAAGTATTTGGTGCAAGCAATGTTTCAAAGCTTCTTGCACATCTCCCTTTGACTGATCGCTTTGAAGCTGCACTCACAATTTCTTATGAAGCTCAAGCTAGACTTCAAGACCCTATTTATGGATGTGTTGCTCATATTTTTTCACTCCAACAACAGGTGGTGAGTTTACAAGCACAACTAGCTTATCTTAGGGAACAAGCAGCTCAAAGATGTATCTCTCATGAAAACCCTAATGAGAAATACTTTGGAAAACCTGCTATTCCACCTCAAGATCTTCAAAGTTGGATCCAAATGGAAAATTCCAACATGAATTCTAATCAATTTCTTCCCAACATGTTCTCCATTACTAATCTCTCAACAACACAGTATTATGAGAATACCACTACTCTGATGGACATAAACCCTATTAATATTGGAAACTATGAAAATTCAGGAACCTTGGAAGAAAGCATGTCATCATTTTCTAGGTTTGATGAGAGATGTAATCACTCAATTTCCTATTATGACATGGAAAGTGTATAA 645 0.3674 MTGCCSPCGACKFLRRKCVRGCVFAPYFCHEEGATHFAAIHKVFGASNVSKLLAHLPLTDRFEAALTISYEAQARLQDPIYGCVAHIFSLQQQVVSLQAQLAYLREQAAQRCISHENPNEKYFGKPAIPPQDLQSWIQMENSNMNSNQFLPNMFSITNLSTTQYYENTTTLMDINPINIGNYENSGTLEESMSSFSRFDERCNHSISYYDMESV 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02307 214 Coils Coil 87 107 - -
Car03g02307 214 PANTHER LOB DOMAIN CONTAINING PROTEIN 1 210 - -
Car03g02307 214 ProSiteProfiles LOB domain profile. 6 108 IPR004883 -
Car03g02307 214 PANTHER LOB DOMAIN-CONTAINING PROTEIN 17-RELATED 1 210 - -
Car03g02307 214 Pfam Lateral organ boundaries (LOB) domain 7 104 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02307 Car-Chr3 69062225 69063159 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02307 7 130 AS2 family AT3G58190 72.868 1.68e-65 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Car03g02307 LOB 2.4e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02307 K13945 - gmx:100527324 290.426
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02307 03 69062225 69063159 Car03g02307 03 69062225 69063159 ECH