Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02306 ATGGCTAATTCTACAAGTGGAAGTGGTTCACCTTGTGGAGCATGCAAATTCCTAAGAAGAAAATGTGCATCTGACTGCATTTTTGCACCTTACTTTTGCTCAGAACAAGGACCTGCAAGATTTGCAGCCATACATAAAGTATTTGGTGCTAGCAATGTTTCAAAGTTACTTTTGCATATACCAGCTCATGAACGTTGTGAAGCTGTTGTCACTATTGCTTATGAGGCTCAAGCTCGTATTAGAGACCCTGTTTATGGTTGTGTCTCACACATTTTTGCCTTACAACAACAGGTAGCATGCTTGCAGGCACAGTTGATGCAAGTGAAATCTCAGCTGTCACAGAACATGAACACAGAGAATAATCAGTGGACAGGGaataataataataataataataTTGGTGGAACACAACCAATGAATTATCCATTTTATAATATGAATCCTATATCTCCTCAGAGTTCACTTGAGTCATCAATTGATCACAGCAGCAGCAGCATGAATGATGGAATGATGAACATGCAAGATGTACAAAGTAGCAGAGATGATTTCTCATTCCAACCATGTaataacaataattctaagaaaagaatgtcatataacaataaTTATGAGCACTTGGGTGAGTTGCAAGAACTAGCACTTAGGATGATGAGGAACTAA 660 0.3652 MANSTSGSGSPCGACKFLRRKCASDCIFAPYFCSEQGPARFAAIHKVFGASNVSKLLLHIPAHERCEAVVTIAYEAQARIRDPVYGCVSHIFALQQQVACLQAQLMQVKSQLSQNMNTENNQWTGNNNNNNNIGGTQPMNYPFYNMNPISPQSSLESSIDHSSSSMNDGMMNMQDVQSSRDDFSFQPCNNNNSKKRMSYNNNYEHLGELQELALRMMRN 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02306 219 PANTHER LOB DOMAIN-CONTAINING PROTEIN 16 1 218 - -
Car03g02306 219 Coils Coil 91 111 - -
Car03g02306 219 PANTHER LOB DOMAIN CONTAINING PROTEIN 1 218 - -
Car03g02306 219 Pfam Lateral organ boundaries (LOB) domain 11 109 IPR004883 -
Car03g02306 219 ProSiteProfiles LOB domain profile. 10 112 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02306 Car-Chr3 69054576 69056203 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02306 3 219 AS2 family AT2G42430 54.321 4.59e-79 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Car03g02306 LOB 4.9e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02306 K13944 - gmx:100801508 271.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02306 03 69054576 69056203 Car03g02306 03 69054576 69056203 ECH
Car03g02306 03 69054576 69056203 Car04g00126 04 1257187 1258613 PCT