Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02290 ATGGAGGTTGTTGGCATGAAGAAGGAGAATATGAGGTTTGAGGAAACTGAGTTGAGACTTGGGATTGGATTGCCTAGAAATGGATCAGCTACTGAAGAATTAGTTGTAAGGAAGAGAGGTTTTTCTGAGACTGAAACTCAAGATCATACTATGGATTTGATGCTTAATCTTTCCACTAATAAGGAACCTACTTCTGAGGTAGATCCAATTGATAACACCAAGATTTTGCAAAAGGAGAACACCCTTTTGCCTGCAGATCCAGCCAAACCTCCTGCAAAGGCGCAAGTGGTGGGTTGGCCACCTGTGCGGTCGTACCGGAAGAACATGTTAGCAATGCAAAAGAGTAGTAATGATGTTGTTGGAGAGGAAAATAATGCAATTAGCTTTGTGAAAGTTAGCATGGATGGAGCACCTTACCTTCGCAAAGTGGACTTGAAGATCTACAATAGTTACTCTCAACTTTCTGATTCCTTAGGCAAAATGTTCAGCTCCTTCACCATTGGCAACTGTGAATCTCAAGGAATGAAGGATTTCATGAATGAGAGCAAGCTGATGGATCTTTTGAACAACTCTGATTATGTCCCAACCTATGAAGACAAGGATGGTGACTGGATGGTTGTTGGTGATGTACCATGGGAGATGTTTGTTGAATCATGCAAGCGTTTGCGTATCATGAAAGGAAAGGAGGCTATTGGTATTGCACCAAGAGCCATGGAGAAATGCAAGAACAGGAGCTACTAG 741 0.4224 MEVVGMKKENMRFEETELRLGIGLPRNGSATEELVVRKRGFSETETQDHTMDLMLNLSTNKEPTSEVDPIDNTKILQKENTLLPADPAKPPAKAQVVGWPPVRSYRKNMLAMQKSSNDVVGEENNAISFVKVSMDGAPYLRKVDLKIYNSYSQLSDSLGKMFSSFTIGNCESQGMKDFMNESKLMDLLNNSDYVPTYEDKDGDWMVVGDVPWEMFVESCKRLRIMKGKEAIGIAPRAMEKCKNRSY 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02290 246 Gene3D - 121 238 - -
Car03g02290 246 ProSiteProfiles PB1 domain profile. 127 227 IPR000270 GO:0005515
Car03g02290 246 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 8 238 IPR003311 GO:0005634|GO:0006355
Car03g02290 246 PANTHER AUXIN-INDUCED PROTEIN AUX28 8 238 - -
Car03g02290 246 SUPERFAMILY CAD & PB1 domains 125 226 - -
Car03g02290 246 Pfam AUX/IAA family 16 236 IPR033389 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02290 Car-Chr3 68876299 68880190 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02290 122 230 B3 DNA Binding Superfamily AT3G61830 30.275 1.88e-07 49.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Car03g02290 AUX_IAA 5.7e-80 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02290 K14484 - gmx:100810013 346.28