Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02289 ATGGGGAGCTATGAAACAGAGATGAATCTGAAGGATACAGAGTTAAGATTGGGATTGCCTGGAAGTGATGAACATTCATGCAATGTTTCTGTTGTTAGAAACAACAAAAGATCTTCACCGGAAACAAGTAACAATGTTAGTTCTAATGCTTCTTCTAATTCCTCAACCACAACTGATGATGACCAATCCACTGTCCAACCTACAAAGGTACAAGTAGTGGGGTGGCCACCAATTAGATCTTATAGGAAGAATAGTTTACAACAAAATAAGGTTGAAGATGGAGGTGGAATGTATGTGAAAGTAAGCATGGCTGGTGCACCTTACTTGAGAAAGATAGATCTTCAAGTTTACAAGAGTTATTCAGAACTTCTCATAGCCTTGCAAAATTTGTTCAAGTGTACATTTGGTGAATATTCAGAAAGGGAAGGGTACAATGGATCTGAATATGCTCCTACTTATGAGGACAAGGATGGTGATTGGATGCTTGTTGGCGATGTTCCATGGAAGTAA 510 0.3882 MGSYETEMNLKDTELRLGLPGSDEHSCNVSVVRNNKRSSPETSNNVSSNASSNSSTTTDDDQSTVQPTKVQVVGWPPIRSYRKNSLQQNKVEDGGGMYVKVSMAGAPYLRKIDLQVYKSYSELLIALQNLFKCTFGEYSEREGYNGSEYAPTYEDKDGDWMLVGDVPWK 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02289 169 Pfam AUX/IAA family 33 169 IPR033389 -
Car03g02289 169 Gene3D - 91 169 - -
Car03g02289 169 ProSiteProfiles PB1 domain profile. 96 169 IPR000270 GO:0005515
Car03g02289 169 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 3 169 IPR003311 GO:0005634|GO:0006355
Car03g02289 169 MobiDBLite consensus disorder prediction 1 70 - -
Car03g02289 169 SUPERFAMILY CAD & PB1 domains 92 169 - -
Car03g02289 169 MobiDBLite consensus disorder prediction 27 70 - -
Car03g02289 169 PANTHER AUXIN-INDUCED PROTEIN 3 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02289 Car-Chr3 68862180 68863769 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02289 84 168 B3 DNA Binding Superfamily AT2G46530 35.294 3.21e-09 53.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX or IAA Car03g02289 AUX_IAA 4e-39 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02289 K14484 - gmx:100792134 249.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02289 03 68862180 68863769 Car04g00152 04 1528480 1530223 PCT