Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02278 ATGAGTCTGGAAAAGAATCCTTGTGTTTTTTTAGATGTATCAGTTGATGGGGATCCCGTGGAAAGAATTGTTATTGAGCTTTTTTCTAGTATAGTTCCTAAGACAGCCGAGAATTTTCGGGCCCTTTGTACAGGTGAGAAAGGCATCGGAGAATCAACTGGGAAACCTTTGCATTATAAAGGAACATGTTTTCATCGTGTAATTAAAGGGTTTATGGCTCAAGGTGGTGATTTTTCAAGGGGTAATGGCACTGGTGGAGAAAGTATATATGGAGGAAAGTTTGCAGATGAAAATGTCAAACTAAAACATGATGGACCTGGTATCCTTTCAATGGCTAATAGTGGTCCTAACACCAACGGATCTCAGTTTTTTATTATATTCAAGCGTCAGCCTCATCTTGATGGGAAACATGTTGTTTTCGGAAAAGTTGCCAAGGGATTGGAGATTCTGAAGAAAATGGAGCAGTTGGGAACATCCGACGGGAAACCTGCCCAGCCAATTAAAATTGTTGATTGTGGTGAAATCTCTAAAGCAAAAAGCCAGCATACAGTGGAGAAGGAGAAAGGGAAAAGGAGAAAGTCAGCAAAATCTTTAATTTCTGATGATAGTTCTGATGCCGACAAAAAACCAAGTAGAAAAAGAAAAACATCTTCCAAAGACAGAAGGAAGAGAAGGAGGAGATACTCAACATCTGATAGTGACAGTGATAGTGACAGTTATTCCtcagattctgaatcagattctgactcagattcatcgtattctgattcAAGTTCTTCTAGTGATGGGAAACACCAGAATAGGAAGAAAAATAATCGTAGGCATGGGAAGAAGAGAAGTATTGGACGGAAGCAGAAAAGAAGCCAACACAGTCGTAGAAGATCAAAGCACAAGTCCAAAAGGAGTTCTGAAGGTTCAAGTGATTCAGAAagtgagagttccagtgctagtggtagttctggtgataAGAAAGCTGATCGTCATGTCTCTGGTCGTAAAAAACAGGCCGACAGCAAAGCTAAAAAAAATCTAGACACAGGAAAGCAATCTTCTAGCCTTCCCTTACAAAGTCAAACTATTCCAGAACTAGGGGTGGATCCTAAGGTTAGAAGGACTATGGACAAACAATCACACGAAGAAGGTGAATTGTCTCCAGAAAATGGCGAATTTCTGAATAACAGGCATGATATTCAAGCTGAATTTAGTAAACCTGCTAATCAACATGGTTATTCAGATGATTCAAATCGCAAAAGAGATGTGAGTCCCGGAAGAAGTCCTGCTGGGAGTCCTACCAAGAATTCAGAGGAGCTCAAACGACGTGCTTTACCGGCTAGTCCTGACCAAAAAGCATCTGAACTTGCTGCCTCCAAACATGGCCGGGGAATTTCAAAAAGCCCTTCGCCAAATGGTATGCCAAAGCGCGTTAAAAAAGGACGAGGCTTTACGGAGCGTTATGCCTTTGTACGCAGATATCGTACTCCATCTCCAGAGCGGTCTCCCCATGCATATCGTTATGGCGAAAGAAATATAAGAAGGAATTTTAATAGAAATACAAGCTACAGAAGTTATTCTGAGCGCTCACCACCACGACGTTTTCGAAGCCCACCAAGGCGCAGGAGCCGTCCCAGATACCAGAGCAGAAGAAGTCAGAGTAGGAGCATCTCCCACAGTCCAGAACGAGGCCGATATAGAGACAATGGTCGTGGTCGGAGTCCAATACGTAGTGTTAGCCCAGAAGGCAGGCGACCTTCCATAAGTGACAGATTAAAATCCCGACTTGGTGCACGAGATAATCAACAATCTCCAGACAGAGATAGGCCAAAGTCAAATTCGAGGAGCAATGGCTCTTCAAGTTCAAGATCGCCTGATGCTACACCCCCAAAGCGTTATGACAAAAGGACTTCTGTATCTCGTAGCAGGTCTAGATCGAGCTCTGCATCCGGACATAAGGGTTTGGTTTCGTATGGAGATGCTAGTCCTGATTATGGGGCTAGGTAG 1998 0.4134 MSLEKNPCVFLDVSVDGDPVERIVIELFSSIVPKTAENFRALCTGEKGIGESTGKPLHYKGTCFHRVIKGFMAQGGDFSRGNGTGGESIYGGKFADENVKLKHDGPGILSMANSGPNTNGSQFFIIFKRQPHLDGKHVVFGKVAKGLEILKKMEQLGTSDGKPAQPIKIVDCGEISKAKSQHTVEKEKGKRRKSAKSLISDDSSDADKKPSRKRKTSSKDRRKRRRRYSTSDSDSDSDSYSSDSESDSDSDSSYSDSSSSSDGKHQNRKKNNRRHGKKRSIGRKQKRSQHSRRRSKHKSKRSSEGSSDSESESSSASGSSGDKKADRHVSGRKKQADSKAKKNLDTGKQSSSLPLQSQTIPELGVDPKVRRTMDKQSHEEGELSPENGEFLNNRHDIQAEFSKPANQHGYSDDSNRKRDVSPGRSPAGSPTKNSEELKRRALPASPDQKASELAASKHGRGISKSPSPNGMPKRVKKGRGFTERYAFVRRYRTPSPERSPHAYRYGERNIRRNFNRNTSYRSYSERSPPRRFRSPPRRRSRPRYQSRRSQSRSISHSPERGRYRDNGRGRSPIRSVSPEGRRPSISDRLKSRLGARDNQQSPDRDRPKSNSRSNGSSSSRSPDATPPKRYDKRTSVSRSRSRSSSASGHKGLVSYGDASPDYGAR 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02278 665 MobiDBLite consensus disorder prediction 178 665 - -
Car03g02278 665 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 4 414 - -
Car03g02278 665 MobiDBLite consensus disorder prediction 476 511 - -
Car03g02278 665 MobiDBLite consensus disorder prediction 178 213 - -
Car03g02278 665 MobiDBLite consensus disorder prediction 581 610 - -
Car03g02278 665 CDD cyclophilin_ABH_like 7 173 - -
Car03g02278 665 MobiDBLite consensus disorder prediction 321 344 - -
Car03g02278 665 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 59 76 IPR020892 GO:0003755|GO:0006457
Car03g02278 665 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 20 173 IPR002130 GO:0000413|GO:0003755
Car03g02278 665 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 27 42 IPR002130 GO:0000413|GO:0003755
Car03g02278 665 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 64 76 IPR002130 GO:0000413|GO:0003755
Car03g02278 665 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 107 122 IPR002130 GO:0000413|GO:0003755
Car03g02278 665 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 122 134 IPR002130 GO:0000413|GO:0003755
Car03g02278 665 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 135 150 IPR002130 GO:0000413|GO:0003755
Car03g02278 665 MobiDBLite consensus disorder prediction 367 385 - -
Car03g02278 665 MobiDBLite consensus disorder prediction 553 569 - -
Car03g02278 665 Gene3D - 1 182 IPR029000 -
Car03g02278 665 MobiDBLite consensus disorder prediction 267 300 - -
Car03g02278 665 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 10 174 IPR002130 GO:0000413|GO:0003755
Car03g02278 665 SUPERFAMILY Cyclophilin-like 4 176 IPR029000 -
Car03g02278 665 MobiDBLite consensus disorder prediction 532 546 - -
Car03g02278 665 MobiDBLite consensus disorder prediction 246 261 - -
Car03g02278 665 MobiDBLite consensus disorder prediction 345 359 - -
Car03g02278 665 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP63 4 414 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02278 Car-Chr3 68784433 68790092 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02278 25 171 U-box Gene Family AT5G67530 48.993 8.05e-35 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02278 K09566 - gmx:100807327 749.969