Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02271 ATGAGTAATAGAGACTATGCTTGCCCATCATCAGCCATGAACGTTGAGAGTGTGCAACGTGTGGTTATACCACCACCTAAACCCTTCATTGAGTCTTTCAAACACTCTATGAAAGAGACTCTGTTCCAAGATGACCCATTGAAAAAGTTCAAGAACCAACCCACTTCAAAGAGGTTTGTGCTTGCACTTCAATACTTTTTCCCCATTTTGGAGTGGGCCCCACATTATACCCTTCAGTTTTTGAAATCAGACCTTATTGCTGGGATCACCATTGCTAGTTTGGCTATTCCACAAGGGATTAGTTACGCCAAGCTCGCCAACCTCCCTCCAATTCTTGGACTTTATTCGAGCGTTATACCACCAATTATTTATGCAATGATGGGTAGCTCGAGAGATGTGGCGGTTGGAACTGTGGCGGTTGGATCGCTTCTAATAGGTTCAATATTGAGCCGTGAAGTTAATCCAAATGAAAACCCAACGCTTTATCTCCACCTTGCTTTTACAGCTACATTCTGTGCTGGACTTCTTCAATTATCACTAGGCCTCTTTAGGTTAGGGTTTATTGTGGATTTTCTATCACATGCAGCGATAGTAGGATTCATGGGAGGAGCAGCCACTGTAGTTTGTCTGCAACAATTAAAAGCGATATTTGGTCTTCAGCATTTCACACGTGAATCTGATGTTGTGTCAGTTTTGCGTTCTGTTTTCACCCAAACTAGTCAGTGGAGGTGGGAAACCGCTGTCTTGGGATTTTGCTTTCTTTTCTACCTCTTCCTCGCAAGATACTTCAGCAAACGAAAACCGAAGTTATTTTGGGTGTCAGCAATGGCTCCATTGACGTGTGTCATATTGGGAAGTCTATTGGTTTATTTCACTCATGCCGAGAAGCACGGTGTTCAAGTGATAGGAAAATTGAAGAAGGGGATAAATCCACCTTCGGCAGCAGATTTAGTGTTTGTGTCACCTTATTTGGGCATAGCCATCAAAACTGGATTTATTACTGGTATTATAGCTCTTGCGGAAGGAATAGCTGTAGGAAGAAGCTTTGCAATGTGTAAGAATTACTATATTGATGGCAATAAAGAGATGTTGGCTATGGGAACCATGAATATTTTTGGTTCATTAACCTCTTGCTACCTCACAACTGCACCATTTTCGCGAACGGCTGTGAACTACAATGCTGGATGCAAGACTGCAGCATCAAACCTTGTAATGTCAATAGCAGTAATGTTGACATTGTTATTTCTAACACCCTTGTTCTATTACACTCCTCTGGTGGTGCTAGCATCCATAATTGTATCAGCAATGCTTGGACTCATAGATTTTCAAGCAGCTATTCATTTATGGAAAATTGACAAATTTGACTTTTTAGTATGCCTCAGTGCATATTTTGGAGTTGTCTTTGGCAGTGTTGAAATTGGCTTAGGAATAGCAGTTTCACTATCTTTACTAAGATTACTTTTATTTGTTGCAAGGCCTAAAACATTTGTTTTAGGAAACATTCCAAATTCTGCAGCATACAGAAATGTAGAACATTATCCAAATGCACATAATATTCCTGGAATACTAATTCTTGAAATTGATGCACCAATTTACTTTGCCAATTCAAGCTATTTAAGAGAAAGAATCACAAGGTGGATTGATGAGGAGGAAGAAAGAATAAAAGAGGCAGGGCAGACCAGTTTGCAGTATGTTATAGTGGATATGACTGCTGTAGCAAACATTGATACAAGTGGAATAAGTATGCTTGAAGAGTTCAAGAAGTCGGTGGACCGAAAAGGGATTCAACTTGTTTTGGTCAACACTGGAAGTGAGGTGACAAAGAAGCTGAACAAATCAAAATTCCTTGATGAAATAGGACATAAATGGGTTTATGTGACAGTTGAAGAGGCTGTTGGAGTATGCAGCTATATGATCCATACACACAAGTCAAACCCCATGAGAGATGAATCAGAAGGTTTGAATAGTGTGTGA 1974 0.4012 MSNRDYACPSSAMNVESVQRVVIPPPKPFIESFKHSMKETLFQDDPLKKFKNQPTSKRFVLALQYFFPILEWAPHYTLQFLKSDLIAGITIASLAIPQGISYAKLANLPPILGLYSSVIPPIIYAMMGSSRDVAVGTVAVGSLLIGSILSREVNPNENPTLYLHLAFTATFCAGLLQLSLGLFRLGFIVDFLSHAAIVGFMGGAATVVCLQQLKAIFGLQHFTRESDVVSVLRSVFTQTSQWRWETAVLGFCFLFYLFLARYFSKRKPKLFWVSAMAPLTCVILGSLLVYFTHAEKHGVQVIGKLKKGINPPSAADLVFVSPYLGIAIKTGFITGIIALAEGIAVGRSFAMCKNYYIDGNKEMLAMGTMNIFGSLTSCYLTTAPFSRTAVNYNAGCKTAASNLVMSIAVMLTLLFLTPLFYYTPLVVLASIIVSAMLGLIDFQAAIHLWKIDKFDFLVCLSAYFGVVFGSVEIGLGIAVSLSLLRLLLFVARPKTFVLGNIPNSAAYRNVEHYPNAHNIPGILILEIDAPIYFANSSYLRERITRWIDEEEERIKEAGQTSLQYVIVDMTAVANIDTSGISMLEEFKKSVDRKGIQLVLVNTGSEVTKKLNKSKFLDEIGHKWVYVTVEEAVGVCSYMIHTHKSNPMRDESEGLNSV 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02271 657 Pfam STAS domain 513 631 IPR002645 -
Car03g02271 657 CDD STAS_SulP_like_sulfate_transporter 513 628 - -
Car03g02271 657 PANTHER SULFATE TRANSPORTER 3 655 IPR001902 GO:0015301|GO:0016020|GO:0055085
Car03g02271 657 Pfam Sulfate permease family 81 461 IPR011547 GO:0016021
Car03g02271 657 Gene3D STAS domain 492 637 IPR036513 -
Car03g02271 657 ProSiteProfiles STAS domain profile. 512 635 IPR002645 -
Car03g02271 657 PANTHER SLC26A/SULP TRANSPORTER-RELATED 3 655 - -
Car03g02271 657 ProSitePatterns SLC26A transporters signature. 110 131 IPR018045 GO:0008271|GO:0008272
Car03g02271 657 SUPERFAMILY SpoIIaa-like 514 635 IPR036513 -
Car03g02271 657 TIGRFAM sulP: sulfate permease 68 631 IPR001902 GO:0015301|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02271 Car-Chr3 68686978 68694630 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02271 11 645 Inorganic Solute Cotransporters AT4G02700 64.780 0.0 863
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02271 K17471 - gmx:100804670 1065.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02271 03 68686978 68694630 Car03g02271 03 68686978 68694630 ECH
Car03g02271 03 68686978 68694630 Car04g00173 04 1784595 1789859 PCT