Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02211 ATGTCACTTCTCTTCAATTTCTTTCCCTTCCTTTTCCTTCTCCTCATTTTCCCCACGCCATCCTTCTCCGCCACAGCACCATGTCCTCTCAACATAACCGTCCTCCGCGAAATCGGCGGCGGTTCAAAACCTTCCTCCGACTCCAACTCACAGTGCCATTTCGTCCTCCAAGCTCTCCATCTCGTCCAAGCCGATTACCTCCGCCGCACCGGTTTCTTCGTTCCGCCTCTGAATTCCTCCGAATCATGCTGGACTTCTTTCCAATCATTCATCAACGAATTTCAACCTAATTTCGATATTCGCTCCTCTTGCGGTTTTCAAACATCTTGGATCTCACAAGGTTGCATGAACATCACAACGAAACAACAATTCGAAAATCAAGTTTCGCAGCCGGCACTTCAATCTGTTCAGTCAAACTGTAACGAATCTCTCGAAAACAACACTCCTTGTGCCTATTGCAATGTTCAACTTTCTAATTTGCTTACTTCTTTGACCGGAGTTACCGTCAGTAATGTCTCCGATTGTAGGGCTTATACAACTATTTACGCCGCTACACTTTCCGATCAATTTGGTCCCACTGATGTTGGAACCGCTAAGTGTATGTTCGGTCTTGATTTTTCTTCTTCTTCGAGTTCTAATATTAGGCATCGAACAAttgttattgcgcttgtttcggtttttgtatttttgggattgtttttgtttggtgtgttttgGATTTACATTAGATTTAAGAGGAAGAAGAGAGCGGAAATGAAACGTAATAGTAATCATAATAGAACTGAGATTATTTTGGGTTCGAGTTCTGGCTTGGATTCAATGAACCAAAGTACTACTTTGATTAGGTTTAGTTTTGATGAGATTAAGAAAGCTACTAGGAATTTCAATAGGGAGAATATAATTGGGAGCGGTGGTTATGGGAATGTTTATAAAGGTTTTTTATTTGATGGAACACAAGTTGCATTGAAAAGGTTTAAGAACTGTTCTGTTGCTGGTGATGCAAGTTTTACTCATGAAGTTCAAGTTATCGCGAGTGTTAGGCATGTTAATCTTGTTGCATTAAGAGGTTACTGTACTGCCACTACTAACTTAGAAGGTCATCAGAGGATTATTGTTACTGATTTAATGGAGAATGGGAGTCTTTATGATCATTTATTTGGTTCGGCCAAGAAGAAGTTAAGTTGGCCGATTCGTCAGAAGATTGCTCTTGGCACAGCGAGGGGTTTGTCTTATTTGCATTATGGTGCTCAGCCTTCGATTATCCATAGAGATATTAAAGCTAGTAACATACTCCTTGATGAGAAGTTTGAAGCCAAGGTGGCGGATTTTGGATTGGCGAAGTTCAACCCTGAGGGAATGACTCATATGAGTACTAGGGTGGCCGGAACTATGGGGTATGTCGCTCCGGAGTATGCTTTGTATGGACAGTTGACAGAGAGGAGTGACGTGTTTAGTTTCGGTGTTGTGCTTCTCGAGCTTTTAAGTGGGAGAAAGGCGCTTGAAACCAATGAGGATGGCCAACCCGCTGCTCTCACTGACTTGGCTTGGTCGTTGGTTAGAAACAATAGGCCTTTAGATGTTGTAGAAGACGGTATGCCAGAATCTGGAACACCGGAAATTCTTGAGAAATATGTGTTGGTTGCTGTTTTGTGTTCTCATCCGCAGTTATATGCAAGACCAACAATGGATCAGGTTGTTAAAATGCTGGAGACAGATGATGAAGTAGTGCCGTCGATAGTGGAAAGGCCTATCCCTTTTATTGCTGGAAGACTCGATATTGAGAAATCTGTCGGCAGTAACTCGGGTCAGCTCTGCAGTCCAACTGGATATCAAGCATATACATTACAATTACAAAGTAGCCGTGCTTCTAATGGCGAGGAAGAGGAAGGAAGCCTTGAACGTGGGAGTGTGAGCAAAGATTGA 1923 0.4145 MSLLFNFFPFLFLLLIFPTPSFSATAPCPLNITVLREIGGGSKPSSDSNSQCHFVLQALHLVQADYLRRTGFFVPPLNSSESCWTSFQSFINEFQPNFDIRSSCGFQTSWISQGCMNITTKQQFENQVSQPALQSVQSNCNESLENNTPCAYCNVQLSNLLTSLTGVTVSNVSDCRAYTTIYAATLSDQFGPTDVGTAKCMFGLDFSSSSSSNIRHRTIVIALVSVFVFLGLFLFGVFWIYIRFKRKKRAEMKRNSNHNRTEIILGSSSGLDSMNQSTTLIRFSFDEIKKATRNFNRENIIGSGGYGNVYKGFLFDGTQVALKRFKNCSVAGDASFTHEVQVIASVRHVNLVALRGYCTATTNLEGHQRIIVTDLMENGSLYDHLFGSAKKKLSWPIRQKIALGTARGLSYLHYGAQPSIIHRDIKASNILLDEKFEAKVADFGLAKFNPEGMTHMSTRVAGTMGYVAPEYALYGQLTERSDVFSFGVVLLELLSGRKALETNEDGQPAALTDLAWSLVRNNRPLDVVEDGMPESGTPEILEKYVLVAVLCSHPQLYARPTMDQVVKMLETDDEVVPSIVERPIPFIAGRLDIEKSVGSNSGQLCSPTGYQAYTLQLQSSRASNGEEEEGSLERGSVSKD 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02211 640 Gene3D Phosphorylase Kinase; domain 1 257 374 - -
Car03g02211 640 Pfam Protein tyrosine and serine/threonine kinase 298 569 IPR001245 GO:0004672|GO:0006468
Car03g02211 640 ProSitePatterns Serine/Threonine protein kinases active-site signature. 420 432 IPR008271 GO:0004672|GO:0006468
Car03g02211 640 ProSitePatterns Protein kinases ATP-binding region signature. 301 323 IPR017441 GO:0005524
Car03g02211 640 MobiDBLite consensus disorder prediction 618 640 - -
Car03g02211 640 SMART serkin_6 295 576 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g02211 640 CDD STKc_IRAK 301 570 - -
Car03g02211 640 Gene3D Transferase(Phosphotransferase) domain 1 376 579 - -
Car03g02211 640 Pfam SPARK 25 175 IPR043891 -
Car03g02211 640 SUPERFAMILY Protein kinase-like (PK-like) 271 570 IPR011009 -
Car03g02211 640 PANTHER OS01G0253100 PROTEIN 18 623 IPR045271 GO:0004714|GO:0006468
Car03g02211 640 MobiDBLite consensus disorder prediction 626 640 - -
Car03g02211 640 PANTHER RECEPTOR-LIKE KINASE IN IN FLOWERS PROTEIN 18 623 - -
Car03g02211 640 ProSiteProfiles Protein kinase domain profile. 295 587 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02211 Car-Chr3 68188380 68190683 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02211 13 615 Receptor kinase-like Gene Family AT2G48010 60.165 0.0 755
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Car03g02211 PK_Tyr_Ser-Thr 4.4e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02211 - - gmx:100786298 939.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02211 03 68188380 68190683 Car03g02211 03 68188380 68190683 ECH
Car03g02211 03 68188380 68190683 Car04g00814 04 8056783 8058681 ECH
Car03g02211 03 68188380 68190683 Car04g00814 04 8056783 8058681 PCT