Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02200 ATGTTAAGTTTGAGTTTGGGAAATGAGTCATCTGGTGAAGGCTCAACCGCCGCTAATGAATGTTCGAAAATGAAGCAAAAAGAAATAGGGATGTGGCTGAGTCTGAAACCACCTGGAGGCCATAGTTGCATGCTATGCAACAAGAGCTTCAAATCTTTGCAGGCAATGGGAGGACACCAGAATGCTCACCGCAATCTGCGGTTTCAGATTAAGATGCACAATCTGTACCTCaagatgatcgaagaagaagaagaaaagaagaaattggagactattcaagaggaagatcacgcagatgaagatgacgatgaaTCTGTAGGAATTGACTTGGATCTGCACCTCAATTTTCGTCCTGCAACAAAAAAGGTGAGAGATTCCTATGACTTCATTCCTAATAAGAAGATGAAAATATCATGTGGTGGTGGCCACCGTGATTTGAAGGCTTCTGGCGGTGGTGGTGGTGCAGATACTGGAAAATACACAGCGAAAACTGTTTTCATGAAGGAAGTGGACGTGACTCTCAAGTTGTGA 531 0.3748 MLSLSLGNESSGEGSTAANECSKMKQKEIGMWLSLKPPGGHSCMLCNKSFKSLQAMGGHQNAHRNLRFQIKMHNLYLKMIEEEEEKKKLETIQEEDHADEDDDESVGIDLDLHLNFRPATKKVRDSYDFIPNKKMKISCGGGHRDLKASGGGGGADTGKYTAKTVFMKEVDVTLKL 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02200 176 Coils Coil 72 92 - -
Car03g02200 176 SUPERFAMILY beta-beta-alpha zinc fingers 34 77 IPR036236 -
Car03g02200 176 Pfam C2H2-type zinc finger 41 64 - -
Car03g02200 176 ProSiteProfiles Zinc finger C2H2 type domain profile. 41 68 IPR013087 -
Car03g02200 176 MobiDBLite consensus disorder prediction 1 21 - -
Car03g02200 176 ProSitePatterns Zinc finger C2H2 type domain signature. 43 63 IPR013087 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02200 31 75 C2H2 Transcription Factor Family AT5G06070 46.667 4.15e-08 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02200 - - lja:Lj1g3v4372230.1 68.9366