Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02195 ATGTTGTGTTGTGGAGGTGCAGAAGAAGAGAGCAGTGGGCCACCTGCAAATCAATACGCTGCACCATCAAGAGGGGGTAACGCATACGGTGGAGGCGGAGGCAATGACAGAGGAGAGCCAAGAGGCAATGTTGCCAAGAGTGGTGCTCCACAGAAAGTATTACCAATTGAAATACCCGCTATGCCATTGGATGAGTTAAATAGGTTAACAGGAAACTTCGGTTCAAAGGCTTTTATTGGTGAAGGATCCTATGGAAGGGTTTTCTATGCAAAATTGAGTGATGGTACTGAAGCTGCAATTAAGAAGCTTGATACTAGTTCTTCGCCTGAACCCGACACCGATTTCACTGCTCAGTTATCAGTTGTTTCAAGACTCAAACATGACAATTTTGTGGAGTTGACTGGATATTGTCTAGAGGCAGACAACAGAATTTTGGTTTATCAATATGCAAGTTTGGGTTCTTTGCATGATGTATTACATGGAAGGAAGGGTGTACAGGGTGCTGAACCTGGTCCAGTTTTAAGTTGGAGCCAAAGAGCAAAAATTGCATTTGGTGCAGCAAAAGGCCTAGAGTTTCTTCATGAAAAGGTTCAGCCTTCTATAGTTCATCGCGACGTTCGATCCAGCAATGTCTTGCTGTTCAATGACTATGAGGCCAAGATTGCTGATTTCAGCTTAACAAATCAGTCTTCTGACACGGCAGCTCGGTTACATTCAACAAGAGTCTTGGGAACATTTGGCTATCATGCTCCAGAGTATGCCATGACAGGGCAAATAACACAAAAAAGTGATGTTTATAGTTTTGGAGTTGTGCTTTTAGAACTCTTGACAGGAAGAAAGCCAGTAGACCACACAATGCCTAAAGGGCAACAAAGTCTTGTGACTTGGGCAACTCCAAGGTTGAGTGAGGACAAAGTAAAACAATGTGTGGATCCTAAGCTAAACAATGACTATCCGCCAAAGGCTATTGCTAAGTTGGCAGCTGTTGCAGCACTGTGTGTTCAGTATGAAGCTGATTTCCGGCCAAACATGACCATTGTTGTCAAAGCTCTCCAGCCTCTTCTCAATGCAAAACCGGCTGGTGCTGATTCTAATGCTTGA 1101 0.4387 MLCCGGAEEESSGPPANQYAAPSRGGNAYGGGGGNDRGEPRGNVAKSGAPQKVLPIEIPAMPLDELNRLTGNFGSKAFIGEGSYGRVFYAKLSDGTEAAIKKLDTSSSPEPDTDFTAQLSVVSRLKHDNFVELTGYCLEADNRILVYQYASLGSLHDVLHGRKGVQGAEPGPVLSWSQRAKIAFGAAKGLEFLHEKVQPSIVHRDVRSSNVLLFNDYEAKIADFSLTNQSSDTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVTWATPRLSEDKVKQCVDPKLNNDYPPKAIAKLAAVAALCVQYEADFRPNMTIVVKALQPLLNAKPAGADSNA 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02195 366 Gene3D Transferase(Phosphotransferase) domain 1 151 364 - -
Car03g02195 366 ProSitePatterns Tyrosine protein kinases specific active-site signature. 201 213 IPR008266 GO:0004672|GO:0006468
Car03g02195 366 Pfam Protein tyrosine and serine/threonine kinase 78 351 IPR001245 GO:0004672|GO:0006468
Car03g02195 366 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 1 365 - -
Car03g02195 366 SMART tyrkin_6 73 351 IPR020635 GO:0004713|GO:0006468
Car03g02195 366 Gene3D Phosphorylase Kinase; domain 1 42 149 - -
Car03g02195 366 MobiDBLite consensus disorder prediction 1 50 - -
Car03g02195 366 PANTHER OS03G0226300 PROTEIN 1 365 - -
Car03g02195 366 SUPERFAMILY Protein kinase-like (PK-like) 52 351 IPR011009 -
Car03g02195 366 PIRSF ILK 39 360 - -
Car03g02195 366 ProSiteProfiles Protein kinase domain profile. 73 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g02195 366 ProSitePatterns Protein kinases ATP-binding region signature. 79 102 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02195 Car-Chr3 68029197 68033227 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02195 64 352 Receptor kinase-like Gene Family AT4G02010 47.945 1.41e-84 269
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Car03g02195 PK_Tyr_Ser-Thr 9.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02195 - - gmx:100812507 672.159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02195 03 68029197 68033227 Car03g02195 03 68029197 68033227 ECH
Car03g02195 03 68029197 68033227 Car04g02145 04 28722530 28726710 PCT