Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02179 ATGTTTAAGCGGCTTAAAAATATAGTTAGTAAGCGCAAAAGCGAATATTTTGTTGACATTAATGAATTTGATGAAGATCCTCTTGGGTGGTCTAGGGAACTTTGTGAGCATCAATTAGGTGAATTCTCCATGGCTGCGGTTCAGGCCAATGGCAATATGGAGGATCGATGCCAGCTTGAGGTTGGCACTAAAGCACTCTTCGTTGGAATTTACGATGGTCATAAAGGCGACATCACGTCAAACATCATGAGTAATACCCTCTTCCAGGATCTATTGTGGTATATTAATGAGAATGGCACCAATATGTCTGAAGATATTCTGAAGACAGTTGTTGCTGAAACCGAGGGAGAGTTCATGCTTGATGTTGAAGAGGGTTATCAACAACAGCCAGAGCTAGGTATAGTTGGTTCGAGTTGTCTATTTTGTATTATATGGAAAGGGAGACTATATATCGCCAACCTTGGAGACTCCCGTGCTGTAATGGGTTCTGTAGGAGGTCCATTTAATAGATTATGTGTTCGACAGTTGGTCAGAGATCACAATGCTCGCAATGAGGATATTAGACTAGAACTCATGAATTTGCATCGAGATGATCCGAATATTGTGACCTTTAATTTTAACGCATGGCATGTTAAAGGCATAAGCGAGGTAAGCAGATGTATAGGACACGCATATTTGAAGCGGGAACCTTTCATTTTAAGCTCACCATTCCAAGCCCCAGAGTCCGAACGCGTGCCTTCTCCTTTTACCCGACCATTGCTATCCGCAGAACCTGCGATACATTCGAGAGTCTTAAATAACAGTGATAAATTCATTATATTTGGATCCGGTGGACTTTGGAAACTATTGACAAATAAGCAAGCTGCTAAAATTGTTAAGACCAATCCACGAGATGGAATTGCAAAAAGACTTGTGAGGATTGCTCTAGAGATTGCAGCAAGAAGAAGGAATATAAGTTATACTGAGCTTAGAGGGATTCCTAAGGGACGTGGTGTTAGTAGGGCGCCTAGTGTTTCTGTTGAAGGAACTAGGCGTGAATATCATGATGATATCACTGTGATAGTTGTATTCTTCGACAAAGAGCCAAATCGGAATCAGACTGCAACACCAGCAATCATCTCGGTGCCAGGGGTCAATTCCTTCAGAGGCTTCTCTGACACGATTCAACCATCAAGTTTTATGTATTTCGACGCACCTGAAATCGCCGCCTATGAAcaagTTATTGTTGACACTGAGGCAGGGTTTATTGAGTTTGCCAGAAACAATTATCAGCAACATCGTAATCCAGTGATAAGTGTAGTTAGTTCGGGTTGTCTAATTTGTGTTATATGGAAAGATACACTGTTTGTCGCCAACGTCGGAGACTCCCGTGTTATACTTGGTTCTCATAAGGGTAAGTTTAAAAGATTGCATATTGACCAAGTGGTCAGAGATCACAATTGTCAAAATTGGGATATTCAAAATGAAATCATCGAATCACATCCGAATGATCATCGTAGACTGGTTGAAGTTAATGGAAAATGGCGTGTTAGAGGCTTATCAGAGATCAGCAGATGTATAGGAAATGCGTATATGAAGAACAAGGAGCCATTTACTGATGCGAGTAATTTCGAAGCCCCGTTAGGGCACCGTGTGTCACTAGATTTCGAAGAACCCTTTCTATCAGCAGAACCAGAGGTTTATTCAAGAGTCTTAAAAGATACTGAAAAATTCATTATATTTGGATCTGGTGGATTTTGGAAAAAGATTACAATTAAGGAAGCAGCTTATATTGTTAACACCCGGCCACGAAATGGAATCGCAAAAAGACTTGTGATGCTTGCTCAAGCGGTTGCGGCTCTCGAAAGGCGAAAAAGATATAATGACATATTGCAGGCTCCTAAGTCAAGTCATGTTAGTGGGAGACGTGTTGTTGCTGATGATGGAAGTAGGACGGATTTTCACGACGATATGACTGTGATTGTTGTATATTTAGACAAAATGCCGAATGGGGGTGTGAGGCCACAGATTAGGTCCTATAGAGGCCATTCTAACACAGTTCGATCATCAGATTTTAGAAATCTCGATGATATGTGA 2076 0.4104 MFKRLKNIVSKRKSEYFVDINEFDEDPLGWSRELCEHQLGEFSMAAVQANGNMEDRCQLEVGTKALFVGIYDGHKGDITSNIMSNTLFQDLLWYINENGTNMSEDILKTVVAETEGEFMLDVEEGYQQQPELGIVGSSCLFCIIWKGRLYIANLGDSRAVMGSVGGPFNRLCVRQLVRDHNARNEDIRLELMNLHRDDPNIVTFNFNAWHVKGISEVSRCIGHAYLKREPFILSSPFQAPESERVPSPFTRPLLSAEPAIHSRVLNNSDKFIIFGSGGLWKLLTNKQAAKIVKTNPRDGIAKRLVRIALEIAARRRNISYTELRGIPKGRGVSRAPSVSVEGTRREYHDDITVIVVFFDKEPNRNQTATPAIISVPGVNSFRGFSDTIQPSSFMYFDAPEIAAYEQVIVDTEAGFIEFARNNYQQHRNPVISVVSSGCLICVIWKDTLFVANVGDSRVILGSHKGKFKRLHIDQVVRDHNCQNWDIQNEIIESHPNDHRRLVEVNGKWRVRGLSEISRCIGNAYMKNKEPFTDASNFEAPLGHRVSLDFEEPFLSAEPEVYSRVLKDTEKFIIFGSGGFWKKITIKEAAYIVNTRPRNGIAKRLVMLAQAVAALERRKRYNDILQAPKSSHVSGRRVVADDGSRTDFHDDMTVIVVYLDKMPNGGVRPQIRSYRGHSNTVRSSDFRNLDDM 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02179 691 Gene3D - 9 368 IPR036457 -
Car03g02179 691 Gene3D - 379 662 IPR036457 -
Car03g02179 691 PANTHER ALPHABET, ISOFORM E-RELATED 405 660 - -
Car03g02179 691 PANTHER ALPHABET, ISOFORM E-RELATED 20 376 - -
Car03g02179 691 CDD PP2Cc 42 358 IPR001932 -
Car03g02179 691 ProSiteProfiles PPM-type phosphatase domain profile. 369 658 IPR001932 -
Car03g02179 691 PANTHER PROTEIN PHOSPHATASE 2C 68-RELATED 20 376 - -
Car03g02179 691 PANTHER PROTEIN PHOSPHATASE 2C 68-RELATED 405 660 - -
Car03g02179 691 SMART PP2C_4 33 356 IPR001932 -
Car03g02179 691 SMART PP2C_4 365 656 IPR001932 -
Car03g02179 691 CDD PP2Cc 414 658 IPR001932 -
Car03g02179 691 ProSiteProfiles PPM-type phosphatase domain profile. 38 358 IPR001932 -
Car03g02179 691 Pfam Protein phosphatase 2C 414 612 IPR001932 -
Car03g02179 691 Pfam Protein phosphatase 2C 64 313 IPR001932 -
Car03g02179 691 SUPERFAMILY PP2C-like 43 360 IPR036457 -
Car03g02179 691 Coils Coil 177 197 - -
Car03g02179 691 SUPERFAMILY PP2C-like 428 661 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02179 Car-Chr3 67903057 67908102 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02179 411 685 PP2C-type Phosphatase Gene Family AT5G06750 38.434 5.60e-53 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02179 K01102 - pop:7455644 317.005