Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02178 ATGGCTGCTGTTCATGCGAATGGCGATATGGAGGATCACAGTCAGCTTGAAGTTGGCCATAATGAACTCTTCGTTGGAATTTATGATGGCCATAGAGGCAACATTGCTTCAGAGTTCATCAGTAATAACCTCTTTCATGATCTACTTAGGTATATTGAGGAGAATGATAAAAATATTTCTGAAGATATTCTGAGGACAGTTGTTGCTGAAACCGAGGAAAAGTTTATGCTTGAGGTTGAAGAGGGTTATCAACAACAGCCAGAGCTAGGTATAGTTGGTTCAAGTTGTCTAATTTGTGTTATATGGAAAGGGACATTATATATCGCCAACCTTGGAGACTCCCGTGCTGTAATGGGTTCTGTGGGGGGTCCGTTGAATAGGTTCCGTGTTCAACAGTTGGTCAGAGACCACAACGCTCGTAATGAGGATATTAGACTAGAACTCGTGAATTTGCATCCAGATGATCCGAATATTGTGACCTATAATTTTGACGCATGGCGTGTTAAAGGCATAAGCGAGGTAAGCAGAGGTATAGGACACGCGTATTGGAAGCGGGAAGCGTTCACTTTAAACTCATCGTTCCAAGTCCCAGAGTCCGAACGTGTGCCTTCTCCTTTTAACCAACCATTGCTATCAGCAGAACCTGAGATATATTCAAGAGTCTTAAACGACAATGATAAATTCATTATATTTGGATCTGGTGGACTTTGGAAATTGTTGACAAATGAGCAAGCTGCTAAAATTGTTAAGAACAATCCACGTGAAGGAATTGCATCAAGGGTTGTGAAGATTGCTCTAGAGATTGCAGCTGGAAGAAGGAATAAAAGCTATAGTGAGCTTAGGAAGATTCCTAAGGGATATGGTGTTAGTAAGAGGCCTAGTATTTCTGATGAAGGAACTAGGCGGGAATATCATGATGATATCACTGTGATAGTTGTATTCTTGGACAAAAAGCCAATTTGGAATCCGAATGATATCCCTCTTGAAGGAAGAATTGTTTCTTGCAGAGCCTTCTCTAAGCTTGAATTATCAGATTTTAGATCTCTCAGAGTCACACATCAAGCATTTGGAATCTATCTCTAG 1083 0.4072 MAAVHANGDMEDHSQLEVGHNELFVGIYDGHRGNIASEFISNNLFHDLLRYIEENDKNISEDILRTVVAETEEKFMLEVEEGYQQQPELGIVGSSCLICVIWKGTLYIANLGDSRAVMGSVGGPLNRFRVQQLVRDHNARNEDIRLELVNLHPDDPNIVTYNFDAWRVKGISEVSRGIGHAYWKREAFTLNSSFQVPESERVPSPFNQPLLSAEPEIYSRVLNDNDKFIIFGSGGLWKLLTNEQAAKIVKNNPREGIASRVVKIALEIAAGRRNKSYSELRKIPKGYGVSKRPSISDEGTRREYHDDITVIVVFLDKKPIWNPNDIPLEGRIVSCRAFSKLELSDFRSLRVTHQAFGIYL 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02178 360 CDD PP2Cc 10 315 IPR001932 -
Car03g02178 360 ProSiteProfiles PPM-type phosphatase domain profile. 1 315 IPR001932 -
Car03g02178 360 SMART PP2C_4 1 313 IPR001932 -
Car03g02178 360 Pfam Protein phosphatase 2C 20 265 IPR001932 -
Car03g02178 360 Gene3D - 1 320 IPR036457 -
Car03g02178 360 PANTHER ALPHABET, ISOFORM E-RELATED 3 318 - -
Car03g02178 360 PANTHER PROTEIN PHOSPHATASE 2C 68-RELATED 3 318 - -
Car03g02178 360 SUPERFAMILY PP2C-like 8 316 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02178 Car-Chr3 67898890 67900893 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02178 1 316 PP2C-type Phosphatase Gene Family AT5G06750 47.962 7.96e-95 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02178 K01102 - gmx:100806476 305.834