Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02159 ATGGTTGGTGGAGGAATACTAATAGCTACGGGTGTGGCACTCCTTGTTGCAATCCGTTTGAACAAAGTGCATGCTCAAAGCCGGAACTTGAATTACTCAGAAAACAATGATAGCTCTTTGCATTCTCATCCAACCAGTGCAAGCATAGAGGTCTCTTCTGCCGAACTAGACGACAGGCCACTACTCCCACCTGTTAACGTTGCATCTCTTTTGGGTCCAATGCGATTTCCTTTCCTACGGCATAACGATGTAGAGGAAGCAACAAGAAGAAGTTTTTCTAAAAGAGGAAAATCCACTGGAAGGACGAACATCTATACCATAGCGGAGCTTCAGTTGGCAACTAACTTCTTCAATGAAGGCAACCTTCTGGGAGAAGGATCTATTAGCCCTGTTTACAAAGCTGAATTTCCCGATGGCAAAATTTCGGCTGTGAAAATCATAAACATGGCCGGTCTGTCTTATGGAGAAGAGGAAAAGTTCTTGGATGTCATTTGCACGGTTTCCAAACTGAAGCACCCCAACATCATACCACTCAATGGTTACTGTTTGGAGCATGGAGAACATCTTCTTGTTTATGATTACTTTGGGAATTTAACTCTAAATGATGCTCTTCACAGTGAAGCATGCGAACCACTATCGTGGGTCCACCGTCTTCAGATTGCTCTAAGTGTTGCTCAGGCTCTGGACTATTTGCACTCAGCGTGCTGCCCTCCTGTGGCCCATGGTAACTTGAAGTCTGCCAATGTTTTATTGGATGAAAAGTTGATGCCTCGTGTTTGTGACTGTAGCTTGGCTATTTTGAAACCACTGATGAAGAGCAATCAAGTTAAAATTCCAGCTACTGAGACTACTGTTGCAGAGAGAGGCTACGTTCCACCTGACCATGGCCAAATAGGATTCAGCAGAAGGAGAGATGTTTTTGCCTTTGGAGTATTGCTTCTGGAATTGTTAACAGGAAGAAAACCTTTCGACAGTGCCAGGCCAAGGGATGAGCAATATCTTGCGAAATGGGCGTCCCCCAGGCTTCGTGATAGCGTGAGTTTGAATCTGATAGTGGATCCCAGTATGAAAACAACATTTTCATCCAAGGCTCTTTCTCGTTATGCTGATATCATCTCTCTCTGTATACAGCCTTCAAAACAACTCCGTCCCCCAATGTCTGAAGTTGTGAACTCTCTTGCATCTTTTTCCCAAAAGTTCAACTTTGCAAAGAGTGGAGTAGCAAATGGTACTGAAGTACCTCCTGATCTATTTGAAAAGTCTTTCCGTTCAGCCAACACACGCTTTATAGCTTCGCCAACAACGAGCCATTTATCAGCCTGA 1323 0.4414 MVGGGILIATGVALLVAIRLNKVHAQSRNLNYSENNDSSLHSHPTSASIEVSSAELDDRPLLPPVNVASLLGPMRFPFLRHNDVEEATRRSFSKRGKSTGRTNIYTIAELQLATNFFNEGNLLGEGSISPVYKAEFPDGKISAVKIINMAGLSYGEEEKFLDVICTVSKLKHPNIIPLNGYCLEHGEHLLVYDYFGNLTLNDALHSEACEPLSWVHRLQIALSVAQALDYLHSACCPPVAHGNLKSANVLLDEKLMPRVCDCSLAILKPLMKSNQVKIPATETTVAERGYVPPDHGQIGFSRRRDVFAFGVLLLELLTGRKPFDSARPRDEQYLAKWASPRLRDSVSLNLIVDPSMKTTFSSKALSRYADIISLCIQPSKQLRPPMSEVVNSLASFSQKFNFAKSGVANGTEVPPDLFEKSFRSANTRFIASPTTSHLSA 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02159 440 ProSiteProfiles Protein kinase domain profile. 117 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g02159 440 PANTHER STRUBBELIG-RECEPTOR FAMILY PROTEIN 1 440 - -
Car03g02159 440 Gene3D Phosphorylase Kinase; domain 1 80 194 - -
Car03g02159 440 Pfam Protein kinase domain 118 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g02159 440 PANTHER OS01G0253100 PROTEIN 1 440 IPR045271 GO:0004714|GO:0006468
Car03g02159 440 SUPERFAMILY Protein kinase-like (PK-like) 98 393 IPR011009 -
Car03g02159 440 Gene3D Transferase(Phosphotransferase) domain 1 196 411 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02159 Car-Chr3 67775656 67778643 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02159 15 440 Strubbelig Receptor Gene Family AT5G06820 49.655 3.37e-121 368
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Car03g02159 Pkinase 2.7e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02159 - - gmx:100775254 586.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02159 03 67775656 67778643 Car03g02159 03 67775656 67778643 ECH
Car03g02159 03 67775656 67778643 Car04g02177 04 29728431 29733663 PCT