Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02156 ATGGCAGGGAGTACTACTTTCTACACCTCCTGCAACTTAGGGAGATGTTGTTTGTTATTAAAAACTCACAATGCAAGGAAAGTATCTCAATGTGGAATGAAAAGGAACTTTAGAATAAAAGCAGAAGTGAAGTTTGTAACAGCTGAAGAAGCTAAGGAACTTGTAGCTGTAGATGGATATAATGTTCTTGATGTGCGGGACAAAACTCAGTTTGAACGAGCTCACATTAAAACATGTTATCATGTCCCTCTTTTTGTTGAAAATAAAGACAATGATCCTGGTACAATCATATTAAGGAGTGTGCACAATAATTTTTCTGGGTTGTTCTTTGGGATACCATTCACAAAGCCAAATCCTGATTTCTTACAATCTGTGAAGACTCAGTTACAGCCTGAGAGTAAACTCTTGGTTGTATGTCAGGAAGGACTGAGGTCTACTGCAGCAGCAAATAAGTTAGAGCAAGCTGGTTTCCAAAATGTAGCATGCATAACATCTGGACTTCAAACTATCAAACCAGGGACATTTGAATCTGTTGGCTCCACTGAGTTGCAGAATGCTGGCAAAGCTGGTTTGGTGCAAGTCCAAGGAAAAATTTCGGCTGTGTTGGGAACTGTTCTTATTTGTGCATTTTTATTCATTACATTCTTTCCTGACCAAGCAGAGAAGCTGATCAAACTGGTCCCTGCAGGCTAA 693 0.3954 MAGSTTFYTSCNLGRCCLLLKTHNARKVSQCGMKRNFRIKAEVKFVTAEEAKELVAVDGYNVLDVRDKTQFERAHIKTCYHVPLFVENKDNDPGTIILRSVHNNFSGLFFGIPFTKPNPDFLQSVKTQLQPESKLLVVCQEGLRSTAAANKLEQAGFQNVACITSGLQTIKPGTFESVGSTELQNAGKAGLVQVQGKISAVLGTVLICAFLFITFFPDQAEKLIKLVPAG 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02156 230 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 41 168 IPR036873 -
Car03g02156 230 SMART rhod_4 46 176 IPR001763 -
Car03g02156 230 CDD RHOD 50 171 - -
Car03g02156 230 Pfam Rhodanese-like domain 47 169 IPR001763 -
Car03g02156 230 ProSiteProfiles Rhodanese domain profile. 56 179 IPR001763 -
Car03g02156 230 Gene3D - 31 176 IPR036873 -
Car03g02156 230 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 9, CHLOROPLASTIC 6 229 IPR044615 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02156 Car-Chr3 67765551 67767908 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02156 5 223 Sulfurtransferasese or Rhodanese AT2G42220 67.273 2.76e-110 314
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02156 - - ccaj:109797004 362.459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02156 03 67765551 67767908 Car03g02156 03 67765551 67767908 ECH