Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02154 ATGAGTCTCAAAAGCAATAACTTCCTATCTCTTTTTGTTTCCATAGTTGCAATTTTTGCCTCTTTGTATCTCATAAATCCAAATCCACATGAGTTCCTCAACAACTTCAAATACTTAAGTTTCACAATTATGACACCATCATCTATATATTTGGCATTGCCTTTAACCTATAACTTTGGCATAAGAGACCATCATCATCGACCACACAAAAAACACCCTGATAGTGGAAATGCTGATTCTGTTTGTGATGATTTTCCACCAGGAATTCCACCTCCAAACACTGATACAATTTCTTATTTTTGTGTTGATCGAAAAGGGTGTTGTAATTTTACAACAGTACAACAAGCTGTGAATGCTGTTCCAGATTTTAGCTTAAAAAGAAATATAATATGGATTAACAGTGGCATCTACTATGAGAAAGTCATGGTTCCTAAAACCAAACCCAACATTACATTTCAAGGACAAAGCTATACTTCAACTGCAATTGCATGGAATGATACTGCAAAGTCCGCCAATGGAACCTTTTATAGTGGGTCCGTACAAGTTTTCGCCCCCAACTTCATTGCTAAGAACATAAGCTTCATGAATTTAGCACCAATTCCAACTCCTGGGGCTGAAGGAGCACAAGCAGTAGCTATGAGGATATCAGGAGATCAAGCTGAATTCAGGGGCTGTGGATTCTTTGGAGCCCAAGATACCCTTCATGATGATAAGGGTCGCCATTACTTCAAAGATTGCTATATCCAAGGTTCCATTGATTTCATATTTGGTAACGCAAGGTCACTCTATGAGAATTGTCAAATAGTTTCTATTGCAAATCCGGTACCTCCAGGACAAAAGAACATAAACGGTGCGGTCACGGCTCATGGTAGAGTTTCAATGGATGAAAATACAGGATATGCATTTGTGAACAGTACAATAGGAGGCAATGGTAGAATATGGTTGGGTCGGGCATGGAGGCCATATTCTCGTGTTGTTTTTGCATTCACAATTATGTCAGACATCATTGCCCCTGAAGGTTGGAATGATTTCAACGACCCTACTAGAGACCAGACTATCTTTTATGGAGAGTACAATTGTTCTGGGCCCGGGGCTAATGTAAATACGAGGGCTCCTTATGTGCAAAGATTGAACGATACACAAGCTTTTCCATTCCTCAATGCAAGTTTTATTGATGGGGATCTATGGTTGGAAACTTAG 1200 0.3942 MSLKSNNFLSLFVSIVAIFASLYLINPNPHEFLNNFKYLSFTIMTPSSIYLALPLTYNFGIRDHHHRPHKKHPDSGNADSVCDDFPPGIPPPNTDTISYFCVDRKGCCNFTTVQQAVNAVPDFSLKRNIIWINSGIYYEKVMVPKTKPNITFQGQSYTSTAIAWNDTAKSANGTFYSGSVQVFAPNFIAKNISFMNLAPIPTPGAEGAQAVAMRISGDQAEFRGCGFFGAQDTLHDDKGRHYFKDCYIQGSIDFIFGNARSLYENCQIVSIANPVPPGQKNINGAVTAHGRVSMDENTGYAFVNSTIGGNGRIWLGRAWRPYSRVVFAFTIMSDIIAPEGWNDFNDPTRDQTIFYGEYNCSGPGANVNTRAPYVQRLNDTQAFPFLNASFIDGDLWLET 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02154 399 Pfam Pectinesterase 102 394 IPR000070 GO:0030599|GO:0042545
Car03g02154 399 SUPERFAMILY Pectin lyase-like 100 397 IPR011050 -
Car03g02154 399 Gene3D - 96 399 IPR012334 -
Car03g02154 399 PANTHER PECTINESTERASE 8-RELATED 10 398 - -
Car03g02154 399 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 10 398 - -
Car03g02154 399 ProSitePatterns Pectinesterase signature 2. 248 257 IPR033131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02154 Car-Chr3 67752093 67754970 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02154 71 398 Carbohydrate Esterase AT1G05310 71.341 0.0 516
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02154 - - gmx:100806629 695.271