Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02151 ATGGCTTCAAGTGTTAAAAATCCCAACCAAACCACTACTCAACTAGAACCACTCCCACCACCTCAACACCGTCATCATCAAATTCAACACAATTTTCATGATCATAATCAAATTTCCTTTGGAATGATGCAATCTTCTTCACCCCCCTCTGTCCCCGGAACTTACATAAACAAAGATTCTGGAGCTTATGATTTGGGTGAATTGGATCAAGCCCTTTTTCTCTATCTTAATGGACAAACTGACCCATCAAAAGTTCAAGACCAAAAACAGATGAATTCAACATCAGGAATGAGGCCACCAACTCTAAACATTTTCCCTTCTCAACCTATGCACGTAGACCCATCATCATCCAATTCCAAGACTAGCTTGGAGTTAGTTTCTCTTTCTCCACAAAAAAGTGGATCGAAGAGAGCATCAGAGCCGTCGATGGAATTAACCAACCCACCAAAACAACTACTCGCCTCTGTCTCTGACCCATCCAAACCTGTTAAGCGAGAGAGAAATCATCGCAAGGGTCCAACTTCAAGTTCTGAACAAGAAGGACCTAAAACACCAGATGCTAAGACACTCAGAAGACTTGCTCAGAATAGAGAGGCAGCCAGAAAAAGCAGGCTTAGAAAAAAGGCATATATTCAGCAACTTGAATCAAGCAGGATTAGGCTTAATCAGATGGAACAAGAACTAACACATGCGAGAAATCAAGGCATGTTCTTTGGTGGAGGTGCAATTATGGGAGGAGAACAAGGCATTCCTATCTCAATGAATAGCATTAGCTCAGATGCTGCAATGTTTGACGTGGAATATGGAAGGTGGCTAGAGGAGCACCACCATTTAGTGTGTGAATTAAGAGCTGCAGTTCAAGAGCACCTTTCTGAGAATGAACTTAGAATGTTTGTGGACAAATTCTTAACACAGTATGATCAAGTAATGAATCTAAAGAGCTTAGTTGCAAAAGCAGATATATTCCATCTTGTTTCTGGAATGTGGATGACCCCAGCTGAACGTTGCTTCATGTGGATTGGTGGATTCAAGCCTTCTGAACTCATTAAGGTTATTGTGGGTCAAATTGAGCCTCTATCCGAACAACAAATAATGGGTATATGTGGATTGCAACAATCTACACAAGAGGCAGAAGAGGCTCTCTCTCAAGGACTTGAGGTTCTCAATCAATCTCTTTCCAACACTATAACATCAGACTCATTGAGCTATCCTCCCAATATGAATAACTACATGGAACAAATGGCCATGGCCATGAATAAACTCTCCACTCTTGAAAGTTTCGTTAGACAGGCAGATCTTCTTCGACACCAAACAATTCACCGTCTAAATCAGATCCTAACGACACATCAAGCAGCAAGGTGTTTCATTGCCATGGCAGAATATTTCCATCGTATGCGAGCCTTGAGTTCTCTGTGGTTGGCACGCCCTCGCCAAGAATAG 1440 0.4194 MASSVKNPNQTTTQLEPLPPPQHRHHQIQHNFHDHNQISFGMMQSSSPPSVPGTYINKDSGAYDLGELDQALFLYLNGQTDPSKVQDQKQMNSTSGMRPPTLNIFPSQPMHVDPSSSNSKTSLELVSLSPQKSGSKRASEPSMELTNPPKQLLASVSDPSKPVKRERNHRKGPTSSSEQEGPKTPDAKTLRRLAQNREAARKSRLRKKAYIQQLESSRIRLNQMEQELTHARNQGMFFGGGAIMGGEQGIPISMNSISSDAAMFDVEYGRWLEEHHHLVCELRAAVQEHLSENELRMFVDKFLTQYDQVMNLKSLVAKADIFHLVSGMWMTPAERCFMWIGGFKPSELIKVIVGQIEPLSEQQIMGICGLQQSTQEAEEALSQGLEVLNQSLSNTITSDSLSYPPNMNNYMEQMAMAMNKLSTLESFVRQADLLRHQTIHRLNQILTTHQAARCFIAMAEYFHRMRALSSLWLARPRQE 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02151 479 MobiDBLite consensus disorder prediction 160 176 - -
Car03g02151 479 MobiDBLite consensus disorder prediction 82 190 - -
Car03g02151 479 Gene3D - 187 236 - -
Car03g02151 479 MobiDBLite consensus disorder prediction 82 154 - -
Car03g02151 479 Pfam Seed dormancy control 279 352 IPR025422 GO:0006351|GO:0043565
Car03g02151 479 PANTHER BZIP TRANSCRIPTION FACTOR TGA10 74 478 - -
Car03g02151 479 MobiDBLite consensus disorder prediction 1 18 - -
Car03g02151 479 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 191 206 IPR004827 GO:0003700|GO:0006355
Car03g02151 479 ProSiteProfiles DOG1 domain profile. 261 475 IPR025422 GO:0006351|GO:0043565
Car03g02151 479 Pfam bZIP transcription factor 187 217 IPR004827 GO:0003700|GO:0006355
Car03g02151 479 SUPERFAMILY Leucine zipper domain 190 232 IPR046347 GO:0003700|GO:0006355
Car03g02151 479 PANTHER TRANSCRIPTION FACTOR TGA9 74 478 - -
Car03g02151 479 Coils Coil 207 234 - -
Car03g02151 479 SMART brlzneu 184 237 IPR004827 GO:0003700|GO:0006355
Car03g02151 479 MobiDBLite consensus disorder prediction 1 27 - -
Car03g02151 479 CDD bZIP_HBP1b-like 188 240 - -
Car03g02151 479 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 186 228 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02151 Car-Chr3 67728441 67735053 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02151 53 479 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT5G06839 61.504 0.0 520
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Car03g02151 DOG1 1.6e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02151 K14431 - gmx:100799713 712.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02151 03 67728441 67735053 Car04g02182 04 29981960 29992642 PCT