Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02140 ATGGAACAAGCTACAGTAGGATTGCATGGATCCATTCATGACGGCACTGTACTCGATTCTGTTCAATTTGACGAAGAAATCCAAGGAATCATGGTGCCGGCTCCCGCGCCGGAAAACGCAAGCTCATTCACCGCGCTGCTTGAGCTACCGCCGACGCAAGCCGTTGAGCTCCTTCACTTGCCGGATTGCGACGGAACCGCCTCCCGGAGACTGCCTTGCTGCCACGTCGGCGTGAATCAGAAACCCTATCTTCCGAACTCTTCCAACGGAAATTTGACTTTGACCTTTCCTACCAACGCCGCGTTGATTGAACGCGCCGCGAAATTCTCCGTGTTTGCCGGTGAGAATTCGCTGGGAGAGGCGCGGCTTTTTTCGGTAGGGTCTGGAGCGAATTTGGAAAGTGTGAAGAACGAGCCTCAAGAGACCGATTCGAACCCTTGCTCGACGCAAGAGTGCGTTTCGGATCCAGCTGTTGAGAACAAGAATCAGAGAACCGCGAAGAGAAAGGAGCCAGAGAAGAAGAAGCTTCCGTACGTCCATGTTCGCGTTCGACGTGGTCAAGCCACAGATAGCCATAGCTTAGCAGAGCGAGCTAGGAGAGAGAAGATTAATGCTCGTATGAAGCTTTTACAAGAGCTGGTCCCAGGCTGCGACAAGATATCTGGAACAGCATTGGTTCTGGATGAAATCATCAACCATGTTCAGACTCTACAACGTCAAGTGGAGATCTTATCAATGAAACTGGCAGCAGTTAACCCAAGAATTGATTTCAACATAGACAGATTATTGGCTGCTGATGGATCATCTTTAATGGACATTAACTTACCTAGCATGGTTTCACCTCTCGTCTGGCCAGAAATCCCACTCAACAGTAACAGACAGCAATATCAACAACATTGCCAATTTGATGCATTCCATCAACCACTTTGGGGAAGGGAAGAAGACAACCATAATTTCATGACTCCGGAAAACTCACTCTTGAGTTATGACTCCTCGGCAAATTCAGCATCTCTGCACTCAAATCAACTAAAGATGGAGCTCTGA 1044 0.4866 MEQATVGLHGSIHDGTVLDSVQFDEEIQGIMVPAPAPENASSFTALLELPPTQAVELLHLPDCDGTASRRLPCCHVGVNQKPYLPNSSNGNLTLTFPTNAALIERAAKFSVFAGENSLGEARLFSVGSGANLESVKNEPQETDSNPCSTQECVSDPAVENKNQRTAKRKEPEKKKLPYVHVRVRRGQATDSHSLAERARREKINARMKLLQELVPGCDKISGTALVLDEIINHVQTLQRQVEILSMKLAAVNPRIDFNIDRLLAADGSSLMDINLPSMVSPLVWPEIPLNSNRQQYQQHCQFDAFHQPLWGREEDNHNFMTPENSLLSYDSSANSASLHSNQLKMEL 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02140 347 MobiDBLite consensus disorder prediction 134 160 - -
Car03g02140 347 Gene3D - 184 257 IPR036638 GO:0046983
Car03g02140 347 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 187 237 IPR011598 GO:0046983
Car03g02140 347 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 185 256 IPR036638 GO:0046983
Car03g02140 347 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 15 174 IPR024097 GO:0006355
Car03g02140 347 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 175 347 IPR024097 GO:0006355
Car03g02140 347 SMART finulus 193 243 IPR011598 GO:0046983
Car03g02140 347 Coils Coil 227 247 - -
Car03g02140 347 MobiDBLite consensus disorder prediction 134 173 - -
Car03g02140 347 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 15 174 - -
Car03g02140 347 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 175 347 - -
Car03g02140 347 CDD bHLH_AtBPE_like 177 262 - -
Car03g02140 347 Pfam Helix-loop-helix DNA-binding domain 191 238 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02140 Car-Chr3 67625403 67633702 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02140 4 347 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G57800 50.777 2.09e-103 307
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Car03g02140 HLH 1.9e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02140 - - gmx:100814124 532.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02140 03 67625403 67633702 Car04g02197 04 30432909 30438705 PCT