Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02134 ATGACTACATTCTGTATATACCTATTCCTTCTTTCTTTAACCTTTCCAATCTTCAACCTCACTTCATCTTCATCAGAAAGTGATTCCCTTCTTTTATTCAAATCCTCCATTGAAGACTCCAAAAATGCTTTGTCTAGTTGGTCAAACACTTCATCAAACCACTTGTGTAACTGGACAGGAATAGTTTGTTCAACTTCACTCTCAGTAACTTCTGTTAATCTTCAAAGCTTAAACCTTTCTGGTGATATCTCATCTTATATATGTGATCTTCCTAATCTCTCTTATCTCAACCTTGCTAATAACATCTTCAACCAACCTATTCCGCTTCATCTCTCTCAATGTAGTTCATTACAAAGTTTGAATCTTAGTAATAATCTTATATGGGGTACTATCCCTTCTCAGATTTCTCAGTTTGGTTCTTTATCAGTGCTTGATTTGAGTGGAAACCATATAGAAGGAAATATACCTGATACTTTAGGCTCATTGAAGAATCTTCAAGTTCTTAACTTTGGAAACAACTTGCTCTCAGGTGATGTACCAAGTGTTTTTGGAAATTTAACTAAGCTTGAAGTTCTTGATTTGTCTCTGAATCCTTACTTGGTGAGTGAGATTCCTAAGGATATTGGTGAGCTTGGAAATCTAAAGCAACTTTTTTTGCAACGTTCTTCTTTTCAAGGTGAAATTCCAGAGTCTATGAAAGGTTTGCATAGCTTGACTCATTTAGATTTTTCTGAGAATAATCTTACAGGTGTTGTTCCTCAGTCTCTTGTGATTTCTTTTGAGAACTTGGTTTCTTTTGATGTTTCACAAAACAAGCTTTTTGGGCCATTTCCAAATCGTATATGTAAAGGTAAAGGGCTTATTTTTTTAAGTCTTCATACAAATAACTTCACTGGTGTTATACCAAACTCAACTGGTGAATGTAAGTTTCTTGAGAGATTCCAAGTTCAGAACAATGGTTTCTCTGGTGATTTCCCTGTTGTGTTATGGTCACTTCCTAATATTAAACTCATTAGAGGTGAAAACAATAGATTCACAGGACAAATACCTGAGTCAATATCAGAAGCTTCTTTTTTGGAGCAAGTTCAGCTTGATAACAACCATTTTGATGGTGAAATTCCTCAAGGTCTTGGCTTTGTTAAAAGCTTATACAGATTTTCTGCTTCTATTAATCAATTCTATGGTGAAATTCCTCCTAATTTTTGTGACTCACCGGTTATGAGTATAGTGAATCTCTCTCACAATTCTCTTTCTGGTAAAATTCCAGAACTGAAAAAATGCAGGAAACTAGTTTCACTGTCTTTAGCAGACAACAGTTTAACAGGAGAAATTCCTAGTTCTCTTGCTGAGTTACCTGTTCTTACTTACCTCGATCTTTCAGATAACAATCTCACTGGTTCAATCCCACAAGGCCTTCAAAACTTGAAGCTTGCACTTTTCAATGTTTCTTTCAATCAGTTATCAGGTAAAGTACCATACTCATTGATTTCTGGTCTTCCTGCTTCATTTTTGGAAGGAAATCTTGGTCTTTGTGGCCCCGGATTGCCGAATTCATGTTCCGATGATGATAACCCGAGAAACCGGGCTGCTACTGGTCTTACAACCTTAACATGTGCCTTGATCTCTTTGGCTTTTGTTGCTGGAACTTCACTTGTTGCTGGTGGATTTATACTGTATAGAAGATCTTGTAAACGGAATAGTGAAGTTGCAGTGTGGCGTTCGGTGTTTTTCTATCCTCTAAGAATTACTGAGCATGATCTTGTTGTAGGAATGAATGAGAAAAGTTCAATAGGAAATGGAGTTTTTGGTAATGTTTATGTTGTGAGTTTACCTAGTGGTGATTTAGTATCTGTGAAGAAACTAGTTAAATTTGGAAATCAGTCTTCAAAGAGTTTGAAGGTTGAGGTCAAAACTTTGGCTAAAATTAGGCATAAGAATGTTGTTAAGATTCTTGGGTTCTGTCATTCTAATGAGTCAGTTTTTCTTATTTATGAATTCTTGCATGGAGGAAGTTTAGGGGATTTGATTTGTAGTCAAAATTTTCAGttgtattggggaattagattgaagattgctattggtgttgctcaaggacttgcatatcttcataaggattatgtaccacacttggttcataggaatgtcaagtcaaagaacattcttctggatgtaaactttgagccaaaattgacacattttgCTCTTGATAGGATTGTTGGAGAAGCTGCATTTCAATCAACTTTGGATTCTGATGAAGCAGCATCTTCATGTTACATTGCTCCAGAATATGGTTACAACAAAAAACCAACTGAACAATTGGACGTGTACAGCTTTGGAGTAGTATTGCTAGAGCTAGTTTGTGGACGACAAGCAGAGCAAACAGATTCAAGTGACTCCTCTCTTGACATAGTGAAATGGGTCAGAAGAAAAGTGAACATCACTAATGGAGTGCACCAAGTTCTTGACACTAGAATATCACATACTTGTCACCAACAAATGATTGGTGCTTTAGATATTGCTCTACGTTGCACTTCTGTTGTGCCTGAGAAAAGACCATCAATGGTTGAAGTTGTTAGAAGTCTTCAGTCTCTTGAGTCAATGACTTGTGTTGCAAATTTGCAGGGTCCAAATGATGAACCATCCATTCAAGTTTGA 2655 0.3439 MTTFCIYLFLLSLTFPIFNLTSSSSESDSLLLFKSSIEDSKNALSSWSNTSSNHLCNWTGIVCSTSLSVTSVNLQSLNLSGDISSYICDLPNLSYLNLANNIFNQPIPLHLSQCSSLQSLNLSNNLIWGTIPSQISQFGSLSVLDLSGNHIEGNIPDTLGSLKNLQVLNFGNNLLSGDVPSVFGNLTKLEVLDLSLNPYLVSEIPKDIGELGNLKQLFLQRSSFQGEIPESMKGLHSLTHLDFSENNLTGVVPQSLVISFENLVSFDVSQNKLFGPFPNRICKGKGLIFLSLHTNNFTGVIPNSTGECKFLERFQVQNNGFSGDFPVVLWSLPNIKLIRGENNRFTGQIPESISEASFLEQVQLDNNHFDGEIPQGLGFVKSLYRFSASINQFYGEIPPNFCDSPVMSIVNLSHNSLSGKIPELKKCRKLVSLSLADNSLTGEIPSSLAELPVLTYLDLSDNNLTGSIPQGLQNLKLALFNVSFNQLSGKVPYSLISGLPASFLEGNLGLCGPGLPNSCSDDDNPRNRAATGLTTLTCALISLAFVAGTSLVAGGFILYRRSCKRNSEVAVWRSVFFYPLRITEHDLVVGMNEKSSIGNGVFGNVYVVSLPSGDLVSVKKLVKFGNQSSKSLKVEVKTLAKIRHKNVVKILGFCHSNESVFLIYEFLHGGSLGDLICSQNFQLYWGIRLKIAIGVAQGLAYLHKDYVPHLVHRNVKSKNILLDVNFEPKLTHFALDRIVGEAAFQSTLDSDEAASSCYIAPEYGYNKKPTEQLDVYSFGVVLLELVCGRQAEQTDSSDSSLDIVKWVRRKVNITNGVHQVLDTRISHTCHQQMIGALDIALRCTSVVPEKRPSMVEVVRSLQSLESMTCVANLQGPNDEPSIQV 884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02134 884 ProSiteProfiles Leucine-rich repeat profile. 140 163 IPR001611 GO:0005515
Car03g02134 884 ProSiteProfiles Protein kinase domain profile. 591 864 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g02134 884 SUPERFAMILY Protein kinase-like (PK-like) 593 861 IPR011009 -
Car03g02134 884 Gene3D Transferase(Phosphotransferase) domain 1 667 875 - -
Car03g02134 884 Pfam Leucine rich repeat 140 197 IPR001611 GO:0005515
Car03g02134 884 Pfam Leucine rich repeat 213 273 IPR001611 GO:0005515
Car03g02134 884 Pfam Leucine rich repeat 428 487 IPR001611 GO:0005515
Car03g02134 884 Gene3D Ribonuclease Inhibitor 259 522 IPR032675 -
Car03g02134 884 PANTHER OSJNBB0022F23.6 PROTEIN 7 872 - -
Car03g02134 884 SUPERFAMILY L domain-like 24 282 - -
Car03g02134 884 Pfam Protein tyrosine and serine/threonine kinase 594 861 IPR001245 GO:0004672|GO:0006468
Car03g02134 884 SUPERFAMILY L domain-like 202 513 - -
Car03g02134 884 Gene3D Ribonuclease Inhibitor 200 258 IPR032675 -
Car03g02134 884 ProSiteProfiles Leucine-rich repeat profile. 453 476 IPR001611 GO:0005515
Car03g02134 884 Pfam Leucine rich repeat N-terminal domain 24 64 IPR013210 -
Car03g02134 884 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 7 872 - -
Car03g02134 884 ProSitePatterns Protein kinases ATP-binding region signature. 597 620 IPR017441 GO:0005524
Car03g02134 884 SMART LRR_typ_2 451 474 IPR003591 -
Car03g02134 884 SMART LRR_typ_2 162 185 IPR003591 -
Car03g02134 884 SMART LRR_typ_2 115 138 IPR003591 -
Car03g02134 884 SMART LRR_typ_2 235 258 IPR003591 -
Car03g02134 884 SMART LRR_typ_2 90 114 IPR003591 -
Car03g02134 884 SMART LRR_typ_2 186 211 IPR003591 -
Car03g02134 884 Gene3D Phosphorylase Kinase; domain 1 585 666 - -
Car03g02134 884 Gene3D Ribonuclease Inhibitor 22 199 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02134 Car-Chr3 67589271 67592932 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02134 26 864 Receptor kinase-like Gene Family AT5G06940 63.033 0.0 1022
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Car03g02134 PK_Tyr_Ser-Thr 8.1e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02134 - - gmx:100794428 1390.94