Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02133 ATGAACATGTGTTCCAAGTGTTACAAGGACACACTGTTGAAGCAGGAACAGGACAAACTTGCCGCGACATCGGTTGAAAACTTAGTGAATGGCAGCTCCAGTGGGAATGCAAAGCTTGCCGTGACTGCAGGTGCTGTTGATATACATGTCAAAACTGTTAAGGCCAAGACAGTGTGCGTTGAGGTTCCCGAAAATTCAATCTCCGGTGAGAGTGTGGAGATGAAAGCCAAGACTGGTCCCAGCAGATGTGCCACTTGCCGGAAACGTGTTGGATTAACTGGTTTCAGCTGCAAATGTGGCAACCTCTTTTGTTCGATGCACCGCTACTCTGATAAACATGATTGCCCTTTTGATTATAGAACTGTTGGTCAGAAGGCCATAGCTGAAGCCAACCCAGTAATTAAGGCAGGAGAAGTCGTCCAGGTTTTGTTACTATCAAAGAAAAATAGGATTTGA 456 0.4561 MNMCSKCYKDTLLKQEQDKLAATSVENLVNGSSSGNAKLAVTAGAVDIHVKTVKAKTVCVEVPENSISGESVEMKAKTGPSRCATCRKRVGLTGFSCKCGNLFCSMHRYSDKHDCPFDYRTVGQKAIAEANPVIKAGEVVQVLLLSKKNRI 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02133 151 ProSiteProfiles Zinc finger AN1-type profile. 77 123 IPR000058 GO:0008270
Car03g02133 151 SUPERFAMILY AN1-like Zinc finger 74 137 IPR035896 -
Car03g02133 151 SMART AN1_Zf_4 83 120 IPR000058 GO:0008270
Car03g02133 151 Gene3D - 1 34 - -
Car03g02133 151 Pfam AN1-like Zinc finger 83 119 IPR000058 GO:0008270
Car03g02133 151 PANTHER ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 8-LIKE 1 138 - -
Car03g02133 151 Gene3D - 58 138 IPR035896 -
Car03g02133 151 PANTHER AN1-TYPE ZINC FINGER PROTEIN 1 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02133 Car-Chr3 67579210 67583379 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02133 1 142 C2H2 Transcription Factor Family AT3G52800 37.931 6.43e-28 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02133 - - mtr:MTR_7g092400 244.588