Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02131 ATGGTGATGATATGGGAAAATGTAACAGTAAGAATTGGTTCAGAAAAGAAGTTGCTTGATGCTGTCACTGGTTTTGCTCAACCTGCTAGAATCATGGCTGTTATGGGCCCTTCTGGCTCTGGCAAAACCACCCTACTCACTTCTTTGGCTGGATCACTTGCTGCAAATGTTTCAATGACTGGCAACATTGAAATCATTGGGAAAAAGAAGAGAAATTTGTACTCCAAAGAAGTGTCTTATGTGGGTCAAGAAGAAATTTTGTTGGGAACTTTAACTGTAAGAGAAACCCTCACATACTCAGCAAACATGAGACTTCCTTCAAACATGAGCAAACAAGAGATAAAGAAAGTGGTTGAAGAAACAATAATAAAAATGGGTCTTGAAGAATGTGGTGATACTAAAATTGGGAATTGGCATTTAAGGGGTATTAGTAATGGTGAAAAAAAGAGACTTAGCATTGGTCTTGAAATTTTAACACAACCCTTTGTGTTGCTTCTTGATGAACCTACTAGTGGACTAGATAGTGCTTCATCATTTTATGTGATTCAAGCTCTAAGCAATATTGCTTTTGAAGGGAAGATAGTTATTTGTTCCATTCATCAGCCAGGGAGTGAAACTTTTAATATTTTTGATGATTTGCTTTTGTTATCAAGTGGTGAAACTGTTTATTTTGGAGAAAGAAAAATGGCTACAAAGTTTTTTGAAGATGCAGGTTTTCCTTGTCCTATCAAAAGAAATCCTTCAGATCATTTCATTATGAGCATTAATTTGGATTTTGACTTGGTTAACGAAGCTCTTGCAAGATTCCATCCAACATCATCAAATTCAACAACGGGAATGAGAACAGCAGACATTAGAAGGGAACTAATAGAGAGTTACAAAAGTTCAGAGCTAATCATCAATGCAAGAAAAATAATTCAACAACTAAAAACCAATGAAGAGGAAACAATTAACTCCAATATTGTAAGGAGTAGTGCTAGCTGGTGGAAGCAACTGTGCACATTGACCAAACGTTCTTTCCTTAACATGAATAGAAATTTGGGATATTATTGGCTGAGGATTATATTCTACACACTTACAGGAATTACTATTGGCACCCTCTTTTTTCACATTGGCACAAGAAACTCTTCAATTTTGGTTAGAGGAAAGTGTGTATCATTCATTTATGGGTTCATGATATGTTTGGCATGTGGAGGATTGCCATTTTTCATTGAAGAATTGAAGATTTTCATGATGATGCCCTCTCAAATATTTAGACCACTGAATGACATTCCAAAGTTCTTTTGGCGTTATCCTATGTCCTACCTCAGTTTTGCTACTTGGGCTGTGCAAGGACAATACAAGAATGACATGTTGGGGGTTGAATTTGATCCTCTGATACCTGGAGACCCAAAAGTAACTGGAGAACATGTATTGCCAATACTATTTGGTGTTCCACTAAGTCATGGAAAATGGTTGGACCTAACAATGTTGGTTATCTTATTATTAGTTCATAGATTTCTTCTTTTCTTGGTGCTTCGGTATCACAAAAGAGGGATAACACATGTTCTATGGTTTTATGTCAAGAATAATCTACAATCAACAAAAAGAGTTTTATTGAAGAACAAGCAATCTATTTCTTGTAAGAAACAAGAACCACCACAATGTCCACTATCGTCTCTAGAGAATGCTCTGTCTCCAAATTGTGCAATTATATAA 1698 0.3598 MVMIWENVTVRIGSEKKLLDAVTGFAQPARIMAVMGPSGSGKTTLLTSLAGSLAANVSMTGNIEIIGKKKRNLYSKEVSYVGQEEILLGTLTVRETLTYSANMRLPSNMSKQEIKKVVEETIIKMGLEECGDTKIGNWHLRGISNGEKKRLSIGLEILTQPFVLLLDEPTSGLDSASSFYVIQALSNIAFEGKIVICSIHQPGSETFNIFDDLLLLSSGETVYFGERKMATKFFEDAGFPCPIKRNPSDHFIMSINLDFDLVNEALARFHPTSSNSTTGMRTADIRRELIESYKSSELIINARKIIQQLKTNEEETINSNIVRSSASWWKQLCTLTKRSFLNMNRNLGYYWLRIIFYTLTGITIGTLFFHIGTRNSSILVRGKCVSFIYGFMICLACGGLPFFIEELKIFMMMPSQIFRPLNDIPKFFWRYPMSYLSFATWAVQGQYKNDMLGVEFDPLIPGDPKVTGEHVLPILFGVPLSHGKWLDLTMLVILLLVHRFLLFLVLRYHKRGITHVLWFYVKNNLQSTKRVLLKNKQSISCKKQEPPQCPLSSLENALSPNCAII 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02131 565 PANTHER CASSETTE TRANSPORTER, PUTATIVE-RELATED 1 410 - -
Car03g02131 565 PANTHER CASSETTE TRANSPORTER, PUTATIVE-RELATED 408 532 - -
Car03g02131 565 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 1 410 - -
Car03g02131 565 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 408 532 - -
Car03g02131 565 Pfam ABC transporter 25 171 IPR003439 GO:0005524
Car03g02131 565 SMART AAA_5 28 220 IPR003593 -
Car03g02131 565 Gene3D - 2 235 IPR027417 -
Car03g02131 565 Pfam ABC-2 type transporter 331 410 IPR013525 GO:0016020|GO:0140359
Car03g02131 565 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 230 IPR027417 -
Car03g02131 565 Pfam ABC-2 type transporter 200 252 IPR043926 GO:0140359
Car03g02131 565 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 3 243 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02131 Car-Chr3 67554140 67558283 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02131 26 201 Calmodulin-binding Proteins AT2G36910 29.121 1.47e-09 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02131 - - lja:Lj1g3v4239020.2 582.793