Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02125 ATGGAGAAAGGCGCAACTAAGAAGAAACCTCTCTCTTTGGAACAGTTCATCTCTATCACCACCCCTCTTCTCGACTTGGAAAAGGAAGCTGAGATAACGAGCTCAATCGCCACAGGTGCGTCCAGAAATTTGGATTCTGCTCAAAAGAGAGGATCCACAATCCTCAATTTGAAGTGTGTGGATGTCCAGTCGGGGCTTATGGGAAAGTCGCTGATTGAGTTCCAATCCACAAAAGGAGATGTGCTTCCTGCACACAAGTTTGGTACTCATGATGTTGTTGTTTTGAAACTCAACAAGGCTGATTTAGGTTCTCCTGCTCTTGGACAAGGTGTAGTTTACAGATTAAAGGACTCATCAATTACTGTTGCTTTTGATGATATACCAGAAGATGGTTTGAACAGCCCCCTAAGGCTTGAGAAAGTTGCAAATGAGGTGACGTATCGTAGAATGAAAGATGCATTAATACAGTTGAGTAAAGGAGTGCAGAAGGGTCCTGCTTCTGATCTAATTCCTGTCTTGTTTGGGGAGAGGCAACCAACAGTGTCCAAGAAGGATGTATCCTTCACTCTCTTTAATAGAAATCTCGATCACTCTCAGAAAGATGCAATTTCAAAAGCCCTATCGTCGAAGAATGTTTTCTTGCTACATGGACCTCCTGGAACGGGAAAAACCACAACAGTTGTGGAAATTATATTACAAGAAGTGAAACGTGGATCTAAGATTCTCGTTTGTGCTGCCTCAAATATTGCTGTTGACAACATCGTTGAGCGGGTAGTTCCACACAGAGTTAAGCTGGTGAGGATTGGTCATCCTGCACGTTTATTGCCGCAAGTGCTGGACAGTGCACTGGATGCTCAGGTACTACGAGGAGATAATAGTGGTCTCGCAAATGACATTCGGAAAGAAATGAAGGTATTGAATGGAAAGCTGCTAAAAACCAAAGAGAAAAATACAAGGAGGGACATACAGAAGGAACTTAGGTCTCTATCCAGAGAAGAGCGGAAAAGGCAGCAGCTTGCTGTTACAGACGTGATTAAAACTTCAGATGTAATATTAACTACTCTGATTGGGGCTTCCTCTAAGAAACTTGACCACACTTCATTTGATTTGGTGATAATTGACGAAGCTGCTCAAGCACTTGAGGTAGCATGCTGGATACCTCTGCTAAAGGGTTCAAGATGTATACTTGCAGGGGATCATCTTCAACTTCCTCCAACCATTCAAAGCGTTGAAGCTGAGAAGAAAGGCTTAGGAAGAACCCTCTTTGAACGACTTGCAGAGTTGTATGAAGATGAAGTCACATCTATGCTTACCGTCCAGTATCGTATGCATCAACTTATCATGGATTGGTCTTCTAAAGAGCTTTACAATAGTAAGGTGAAGGCTCATGCAAGTGTTGCTGCACATATGCTATATGATCTTGAGAATGTGAAGAGGACATCTTCAACTGAACCAAACCTTCTTCTCATAGACACAGCTGGATGTGACATGGAAGAAAAGAAAGATGAAGAAGATAGCACCCTTAATGAAGGTGAATCTGAGGTTGCTATGGCTCATGCAAAACGATTAGTGCAAAGCGGTGTGCTTCCTTCTGATATTGGAATTATTACCCCATATGCTGCCCAGGTTGTTTTACTCAAGATGTTGAAAAACAAGGAGAATTCACTGAAGGATATTGAAATCTCAACAGTTGATGGTTTCCAGGGAAGGGAGAAGGAAGCCATTATTATATCAATGGTTCGATCAAATTCAAAAAAGGAGGTAGGCTTTCTGAGTGATCGCCGGCGAATGAATGTGGCTGTGACACGGGCAAGAAGGCAATGCTGTATTGTGTGTGACACTGAAACTGTCAGTAGTGATGGATTTCTAAAGCGGTTGGTTGAATATTTTGAAGAGCATGGCGAATATCAGAGTGCATCCGAATACCAGAATGAGTAA 1938 0.4241 MEKGATKKKPLSLEQFISITTPLLDLEKEAEITSSIATGASRNLDSAQKRGSTILNLKCVDVQSGLMGKSLIEFQSTKGDVLPAHKFGTHDVVVLKLNKADLGSPALGQGVVYRLKDSSITVAFDDIPEDGLNSPLRLEKVANEVTYRRMKDALIQLSKGVQKGPASDLIPVLFGERQPTVSKKDVSFTLFNRNLDHSQKDAISKALSSKNVFLLHGPPGTGKTTTVVEIILQEVKRGSKILVCAASNIAVDNIVERVVPHRVKLVRIGHPARLLPQVLDSALDAQVLRGDNSGLANDIRKEMKVLNGKLLKTKEKNTRRDIQKELRSLSREERKRQQLAVTDVIKTSDVILTTLIGASSKKLDHTSFDLVIIDEAAQALEVACWIPLLKGSRCILAGDHLQLPPTIQSVEAEKKGLGRTLFERLAELYEDEVTSMLTVQYRMHQLIMDWSSKELYNSKVKAHASVAAHMLYDLENVKRTSSTEPNLLLIDTAGCDMEEKKDEEDSTLNEGESEVAMAHAKRLVQSGVLPSDIGIITPYAAQVVLLKMLKNKENSLKDIEISTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCIVCDTETVSSDGFLKRLVEYFEEHGEYQSASEYQNE 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02125 645 PANTHER DNA2/NAM7 HELICASE FAMILY MEMBER 11 643 - -
Car03g02125 645 Gene3D - 441 645 IPR027417 -
Car03g02125 645 TIGRFAM TIGR00376: putative DNA helicase 343 640 IPR004483 GO:0003677|GO:0005524
Car03g02125 645 PANTHER HELICASE WITH ZINC FINGER 2 11 643 - -
Car03g02125 645 Pfam AAA domain 418 614 IPR041679 -
Car03g02125 645 Coils Coil 296 332 - -
Car03g02125 645 Gene3D - 39 141 - -
Car03g02125 645 SMART ultradead3 191 442 IPR014001 -
Car03g02125 645 CDD SF1_C_Upf1 443 631 IPR041679 -
Car03g02125 645 CDD DEXXQc_SMUBP2 194 442 - -
Car03g02125 645 Gene3D - 21 425 IPR027417 -
Car03g02125 645 Pfam AAA domain 195 409 IPR041677 GO:0004386
Car03g02125 645 SMART AAA_5 209 431 IPR003593 -
Car03g02125 645 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 192 630 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02125 Car-Chr3 67490142 67497096 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02125 168 382 Core DNA Replication Machinery Family AT1G08840 27.778 3.09e-12 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02125 K19036 - gmx:100810545 1130.16